Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g03088 ATGGATCCTAGACCAGTAACACGATGTGGGTGTAATGCGCGAATACAAGTTCATGTTGACTCGAGGAACGGGCGATGGTACGTTGAGTTCTTCTTCGATGAACATAACCATGACATGTTGGAGGCAAGGTTTAGGGGAATGATGCGGTCTCATCGGGCAATAAAAACGGGGGATTTACACCAAATTAATACCATGAGAAGCTTTGGCCTTCGAGTTCCGACAATATTTCGGGCTTTTGCAAACCAAAGTGGTGGATTCGAGATGGTTGGGTTTGAGGTGAAAGACATCTATAATACAATTGAGAAGCAAAGAAGAGTTGGAGCCAGCGACACGGATAATGCACTAAAGTATTTACAAATGTTGAAGAGTTGTGACCTCTGTATGTTTTGGAAGTATTCATTGGATGAACAACGGAGGCTCCACAATATATTTTGGTGTGATGGCGCAAGTCAGTATGATTTCAATGTTTTCGGAGATGTTATGGGGTTTGATGCAACGTACGGAAGAAATAAGTACAAATGTCCCCTTGTGATATTCTTTGGCGTGGATAACCACATGCGCACTGTTGTGTTTGGATGCGCGGTTCTCTCGACGGAAAGGGAGGAAAGCTATGTGTGGTTGCTTCGGGCATTTGTGGAGGCCATGAAAGGAAAGGCTCCTAAGTCCGTTATTACCGACAATGATCAAGCCATGAAGAGTGCAATTAAAGCTGTATTTCCAGAAGCACATCATAGGTTGTGCAACTGGCACTTGCTATGCAATCCAACCGCTTGA 774 0.4419 MDPRPVTRCGCNARIQVHVDSRNGRWYVEFFFDEHNHDMLEARFRGMMRSHRAIKTGDLHQINTMRSFGLRVPTIFRAFANQSGGFEMVGFEVKDIYNTIEKQRRVGASDTDNALKYLQMLKSCDLCMFWKYSLDEQRRLHNIFWCDGASQYDFNVFGDVMGFDATYGRNKYKCPLVIFFGVDNHMRTVVFGCAVLSTEREESYVWLLRAFVEAMKGKAPKSVITDNDQAMKSAIKAVFPEAHHRLCNWHLLCNPTA 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g03088 257 Pfam MULE transposase domain 160 252 IPR018289 -
Adu01g03088 257 Pfam FAR1 DNA-binding domain 3 40 IPR004330 -
Adu01g03088 257 PANTHER OS02G0262500 PROTEIN 2 251 - -
Adu01g03088 257 ProSiteProfiles WRKY domain profile. 1 40 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu01g03088 257 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 2 251 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g03088 Adu-Chr1 102275139 102275912 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu01g03088 MULE 8.2e-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g03088 - - ahf:112772626 494.197