Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g03085 ATGGTACCCTCCAACCAAGTCCACCTTCAAAAGCAAGAACATATATTCTGTGCAGCTTTTTTTCGGTCTCTATTTTTCGAAGCATGTGGGCGAACGGTTAACCCGGTTAACGGTGACGTTGGACTACTGTGGACTGGAAACTGGCACATGTGCCAGGCCGCCATTGAAACGGTGCTCCAAGGAGGCTCCCTCAGGTCTATGCGGATCTACTCGGTCTCAACGCGCCTGTTCATGTCGCTGTTGACGCCGGCTCCGAGGGGGGAAGTCACGTGCGCTGACGCGCGGAAGCTCTGA 294 0.5476 MVPSNQVHLQKQEHIFCAAFFRSLFFEACGRTVNPVNGDVGLLWTGNWHMCQAAIETVLQGGSLRSMRIYSVSTRLFMSLLTPAPRGEVTCADARKL 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g03085 97 Pfam Lateral organ boundaries (LOB) domain 18 58 IPR004883 -
Adu01g03085 97 PANTHER LOB DOMAIN-CONTAINING PROTEIN 37-LIKE 18 71 - -
Adu01g03085 97 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 18 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g03085 Adu-Chr1 102201420 102201713 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g03085 17 67 AS2 family AT3G49940 74.510 4.74e-24 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Adu01g03085 LOB 9.8e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g03085 - - adu:107468436 137.117