Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g03078 ATGGCGCTGATCTCTCGCAGCGTTACTATTGTCTTTTTCCTCCTCGTGATGGCGAGTTACCGGGTCAACTCGGAGCCAACTCAGGACAAACAAGCCCTCCTTGCTTTCATCTCGAAAACAAAACACCAGAATCGAATCCAATGGAACGCGTCCGACTCGGCCTGCAACTGGGTCGGGGTTCAATGCGACTCGTCCAATTCTTACGTGTACTCGCTCCGCCTGCGCTCCAACGGCCTCACCGGCCAGATCCCCTCCGATTTCTCCAACCTCACCTTTCTCCGCGGTCTCTACCTCCAGAAGAATGAGCTCTCCGGCGAGTTCCCTTCCTCCGCTACTCGCCTAACTCGCTTGACTCGCTTGGATCTCTCCTCTAATAACTTCACAGGCTCCATTCCTTTCTCGGTCAACAACCTCACTCACCTCACTGGTCTCTTTCTCCAGAACAACAGCTTCTCCGGCACACTCCCCAGCATAACCGCCAAATTGAACGACTTCAACGTCTCCAACAACAATCTCAACGGCTCCATCCCCAAGACACTCGCAAAATTCCCCAAATCATCTTTCGCCGGAAACATAGATCTTTGCGGCGGACCTTTACCGGCCTGCAGCCCGTTCTTCCCGGCGCCGGCGCCCTCGCCGGGGGAAATTCCACCTGGAAAACCTGTTCACAAGAAGTCAAACAAACTATCCACCGGCGCCATTGTTGGAATTATCATCGGCTCCGTCGTCGGCTTGCTGCTTCTGCTTCTTCTACTCTTCCTCTGTCTCAGAAAGAGGCAGCGGCGGCAACCTGCTAAACCTCCGAAACCGGTGGTTCCTGTTGCCGCACGTGGAGTACCGGCGGAGGCAGGAACTTCGTCGTCGAAGGAGGACATAACGGGAGGATCAGCGGAAGCAGAGAGGAACAAATTGGTGTTCTTCGAGGGAGGAGTGTACAGCTTTGACTTGGAGGATCTTCTTCGGGCGTCGGCGGAGGTTCTTGGAAAAGGAACCGTGGGTACATCGTACAAGGCGGTGCTGGAGGAAGGGACGACGGTGGTTGTGAAGAGGCTGAAGGACGTAGTTGTTACTAAGAAAGAGTTCGAGATGCAAATGGAGGTTCTTGGGAAGATCAAACACGATAATGTGGTTCCTCTCAGAGCTTTCTATTACTCCAAAGATGAGAAGTTGCTCGTTTACGATTACATGTCCGCCGGCAGCCTCTCTGCTCTTCTCCACGGGAGCAGAGGGTCTGGGAGAACACCATTAGACTGGGACAACAGAATGAAGATTGCACTAGGAGCAGCAAGAGGCCTAGCATGCCTCCACGTGTCAGGCAAAGTGGTCCACGGCAACATCAAATCCTCCAACATCCTCCTACGCGGACCGGACCATGAAGCTGCCGTTTCAGACTTCGGCCTCAACCCATTGTTCGGAAACGGGGGCCCCTCGAACCGCGTGGCAGGCTACCGGGCGCCTGAGGTGGTAGAAACCCGAAAGGCAACCTTCAAGTCTGATGTGTACAGCTTTGGAGTGTTTCTGTTGGAGCTATTGACAGGGAAGGCACCAAACCAAGCGTCGCTTGGGGAAGAAGGCATCGATCTCCCCCGGTGGGTGCAATCGGTGGTCCGGGAGGAGTGGACGGCGGAGGTGTTCGATGCGGAGCTGATGAGGTTCCATAACATAGAGGAAGAGATGGTTCAGCTGTTGCAGATTGCAATGGCTTGTGTGTCTGTTGTGCCGGACCAAAGGCCCAACATGCAAGACGTGGTTCGCATGATTGAGGAGATGAACCGTGGCGAGACCGATGAGGGTTTGAGACAGTCGTCTGATGATCCTTCTAAAGGATCGGAGGGTCATACTCCACCCCAGGAGAGCAGAACCCCACCCAGATCGGTCACACCGTAA 1887 0.5448 MALISRSVTIVFFLLVMASYRVNSEPTQDKQALLAFISKTKHQNRIQWNASDSACNWVGVQCDSSNSYVYSLRLRSNGLTGQIPSDFSNLTFLRGLYLQKNELSGEFPSSATRLTRLTRLDLSSNNFTGSIPFSVNNLTHLTGLFLQNNSFSGTLPSITAKLNDFNVSNNNLNGSIPKTLAKFPKSSFAGNIDLCGGPLPACSPFFPAPAPSPGEIPPGKPVHKKSNKLSTGAIVGIIIGSVVGLLLLLLLLFLCLRKRQRRQPAKPPKPVVPVAARGVPAEAGTSSSKEDITGGSAEAERNKLVFFEGGVYSFDLEDLLRASAEVLGKGTVGTSYKAVLEEGTTVVVKRLKDVVVTKKEFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMSAGSLSALLHGSRGSGRTPLDWDNRMKIALGAARGLACLHVSGKVVHGNIKSSNILLRGPDHEAAVSDFGLNPLFGNGGPSNRVAGYRAPEVVETRKATFKSDVYSFGVFLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDAELMRFHNIEEEMVQLLQIAMACVSVVPDQRPNMQDVVRMIEEMNRGETDEGLRQSSDDPSKGSEGHTPPQESRTPPRSVTP 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g03078 628 PANTHER OS05G0480400 PROTEIN 9 86 - -
Adu01g03078 628 PANTHER OS05G0480400 PROTEIN 71 608 - -
Adu01g03078 628 Gene3D Phosphorylase Kinase; domain 1 288 395 - -
Adu01g03078 628 SUPERFAMILY L domain-like 48 186 - -
Adu01g03078 628 Gene3D Ribonuclease Inhibitor 161 203 IPR032675 -
Adu01g03078 628 MobiDBLite consensus disorder prediction 608 628 - -
Adu01g03078 628 CDD STKc_IRAK 327 590 - -
Adu01g03078 628 MobiDBLite consensus disorder prediction 590 628 - -
Adu01g03078 628 Pfam Leucine rich repeat 69 127 IPR001611 GO:0005515
Adu01g03078 628 Pfam Leucine rich repeat N-terminal domain 27 63 IPR013210 -
Adu01g03078 628 Gene3D Ribonuclease Inhibitor 26 160 IPR032675 -
Adu01g03078 628 ProSiteProfiles Protein kinase domain profile. 321 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g03078 628 Pfam Protein kinase domain 324 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g03078 628 PANTHER OS05G0588300 PROTEIN 71 608 - -
Adu01g03078 628 PANTHER OS05G0588300 PROTEIN 9 86 - -
Adu01g03078 628 MobiDBLite consensus disorder prediction 590 607 - -
Adu01g03078 628 SUPERFAMILY Protein kinase-like (PK-like) 325 588 IPR011009 -
Adu01g03078 628 Gene3D Transferase(Phosphotransferase) domain 1 396 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g03078 Adu-Chr1 102058127 102061825 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g03078 8 608 Receptor kinase-like Gene Family AT5G58300 51.415 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Adu01g03078 Pkinase 6.7e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g03078 - - gmx:100806857 918.687