Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g03076 ATGGCATCACCATCGGAACTAAGCCTTGATTGCAAGCCACACAGCTACTCCATGTTGCTCAAATCCTTTGGAGATCATAATAATAGTAACAGTAATGATCAAGAGCAGAATCAGAGCTACAAGATTGAGGAGTTCCTCTCCCGTCTTGAGGAAGAACGTCTCAAGATCGATGCCTTCAAGCGCGAGCTTCCTCTCTGCATGCAGCTACTCACCAACGCTATGGAGGCGTCAAGGCAGCAACTGCAGGCCTTCAACCAAGGAACAACAAGGCCGGTGCTGGAAGAATTCATTCCCATAAAGCACTCGGAAATCTCAGAGAAGGAGGCGCCGTCTTCCATGAACATGATGATGAGTGATAACAAGGCTAATTGGATGACATCTGCTCAACTATGGAGCCAATCAAGCCAAGAAGTAACGACAAGGGCCGCCACTCCTCCTCCTTCAAAAGATGCTGATAATAACAATAATATTGGATTCATGAGCATGAGCCCCAACAAGCACAGGAACGGGGGCAGTGGAGGAGCCTTCCTGCCGTTCTCCAAGGAACGGAGGAACAACAACAACAACTCTTGTGCATTGGGAGGTGAGCTGGCACTTGCTTCCCCTGACAAGGAAATGCTCATCATGGATGATGATAATAATAATAATAATAATAAGAGAGACCATTCCTCATCAAATGATCAGGGAAAAGGAACTACTACTAGTAGTGCTACTCCACCTCCATCTAACACCACCACCTCTCAAACACACAGGAAAGCAAGAAGGTGCTGGTCACCCGACCTGCACCGTAGATTTGTTAATGCTCTTCAAATGCTAGGCGGATCTCAAGTGGCGACACCAAAACAGATAAGGGAGTTGATGAAGGTTGACGGTTTGACCAATGATGAAGTGAAAAGCCATCTCCAGAAATATAGGCTCCACACGAGAAGACCAAGCCCAAGCCCACAACCAGGTGCACCAGCACCACAGCTTGTGGTCCTAGGAGGAATCTGGGTCCCACCAGAGTACGCCACAGCTGCCGGAGCCCCTGCCGCCATCTACGGTACTCACCACCCCGCCTCCCACGCCCCGCCACCGCACTACTGCGCGGCCACCCCAATGCCTCAGGAGTTCTACACGGCGGCTCCACCTCAGCCGCTTCTTCCGCCTCCGCCTCCTCCGCACCACCTGCACATGTACAAGGCGGCTGGACAGAATAGCTCCCCGGAGTCGGAGGTAGGAGGATGCGGAGAGCGGTCGGAGAGCATCGAGGATGGGAAATCGGAGAGTAGTAGCTGGAAGGGTGAGAGTGAAGGAGAGAGGAAAGGGTTGAATGAGGAGAGTAATTGCAGTGACATCACTCTCAAATTCTAA 1353 0.5122 MASPSELSLDCKPHSYSMLLKSFGDHNNSNSNDQEQNQSYKIEEFLSRLEEERLKIDAFKRELPLCMQLLTNAMEASRQQLQAFNQGTTRPVLEEFIPIKHSEISEKEAPSSMNMMMSDNKANWMTSAQLWSQSSQEVTTRAATPPPSKDADNNNNIGFMSMSPNKHRNGGSGGAFLPFSKERRNNNNNSCALGGELALASPDKEMLIMDDDNNNNNNKRDHSSSNDQGKGTTTSSATPPPSNTTTSQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSPSPQPGAPAPQLVVLGGIWVPPEYATAAGAPAAIYGTHHPASHAPPPHYCAATPMPQEFYTAAPPQPLLPPPPPPHHLHMYKAAGQNSSPESEVGGCGERSESIEDGKSESSSWKGESEGERKGLNEESNCSDITLKF 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g03076 450 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 1 450 - -
Adu01g03076 450 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 252 307 IPR006447 GO:0003677
Adu01g03076 450 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 249 309 IPR017930 -
Adu01g03076 450 Pfam Myb-like DNA-binding domain 254 305 IPR001005 -
Adu01g03076 450 MobiDBLite consensus disorder prediction 397 450 - -
Adu01g03076 450 MobiDBLite consensus disorder prediction 207 226 - -
Adu01g03076 450 MobiDBLite consensus disorder prediction 207 258 - -
Adu01g03076 450 MobiDBLite consensus disorder prediction 130 168 - -
Adu01g03076 450 Gene3D - 251 309 - -
Adu01g03076 450 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 450 IPR044787 GO:0003700|GO:0006355
Adu01g03076 450 MobiDBLite consensus disorder prediction 130 181 - -
Adu01g03076 450 SUPERFAMILY Homeodomain-like 249 310 IPR009057 -
Adu01g03076 450 Coils Coil 42 62 - -
Adu01g03076 450 MobiDBLite consensus disorder prediction 227 252 - -
Adu01g03076 450 MobiDBLite consensus disorder prediction 410 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g03076 Adu-Chr1 101993344 101995278 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g03076 1 374 G2-like Transcription Factor Family AT2G03500 53.351 1.30e-118 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Adu01g03076 Myb_DNA-binding 9.7e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g03076 - - gmx:100807925 492.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g03076 01 101993344 101995278 Adu01g03076 01 101993344 101995278 ECH