Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g03062 ATGGTGTCCTCGAGAAAGGAGTATAAAAAAGAAGAAAAGGAAAATCGAAAAAGTCAGAGGTCGCAATCAGTAGTAGATATTCACACTCATATAACTCTCAATCATCGAAGGAGCCCTCTGAATTTCGCACTAATTTCAAGCGAGATTGTTTTAGGGTTTTCAGTTTCTGAAACTCGCTCCACTGAGATCAAAGATGAGGACTTGGAGGCTGGTTCACTCCCTTGCTGTCGAATTTGTCTTGAAAGCGATTCCGACCCAGAGGATGAATTGATATCTCCATGCATGTGCAAAGGGACCCAACAATTTGTCCACCGTTCATGTCTTGATCACTGGCGCTCGGTAAAGGAAGGATTTGCCTTCTCTCACTGCACTACTTGCAAAGCCCAATATCATCTCAGGGTTGAATTGTTTGAGGACAATTCTTGGCGTAAAGCAAAGTTTAGACTCTTTGTTGCAAGAGATGTTTTCCTTGTTTTTCTGGCTGTACAGACCGTAATTGCGGGTATAGGTGGCTTTGCATACATCATGGACAAGGATGGGAACTTCAGGAACTCCTTTGATGATGGTTGGGATAGGATACTGTCAAAACATCCTATACCATTCTATTATTGTATTGGAGTGCTGGCTTTCTTTGTACTGATCGGGTTTTTCGGTCTCATACTGCATTGCACCTCCCTCAACAGCAATGACCCCAGAATGGCTGGTTGTCAGAATTGTTGTTATGGATGGGGCATCCTTGATTGCTTTCCTGCATCAATGGAGGCTTGTTTTGCCCTTGTTGTGGTTTTCGTAGTCATCTTTGCTATTCTCGGCATTGCTTATGGTTTCCTTGCAGCCACCATGGCAATCCAAAGAATTTGGCAAAGGCACTACCATATTCTCACCAAAAGGGAGCTTACAAAGGAATACGTAGTAGAGGATCTATGTGGGACTTATGTCCCACCAAAGTTGGATCCAGAACATGAAGCTCGCTTGAAAATGCTCAAGCTTTTGTAA 996 0.4327 MVSSRKEYKKEEKENRKSQRSQSVVDIHTHITLNHRRSPLNFALISSEIVLGFSVSETRSTEIKDEDLEAGSLPCCRICLESDSDPEDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQYHLRVELFEDNSWRKAKFRLFVARDVFLVFLAVQTVIAGIGGFAYIMDKDGNFRNSFDDGWDRILSKHPIPFYYCIGVLAFFVLIGFFGLILHCTSLNSNDPRMAGCQNCCYGWGILDCFPASMEACFALVVVFVVIFAILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLCGTYVPPKLDPEHEARLKMLKLL 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g03062 331 CDD RING_CH-C4HC3_MARCH 76 127 - -
Adu01g03062 331 Pfam RING-variant domain 76 126 IPR011016 GO:0008270
Adu01g03062 331 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 55 331 - -
Adu01g03062 331 SMART ringv_2 75 127 IPR011016 GO:0008270
Adu01g03062 331 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 60 140 IPR013083 -
Adu01g03062 331 MobiDBLite consensus disorder prediction 1 22 - -
Adu01g03062 331 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 55 331 - -
Adu01g03062 331 ProSiteProfiles Zinc finger RING-CH-type profile. 68 133 IPR011016 GO:0008270
Adu01g03062 331 SUPERFAMILY RING/U-box 73 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g03062 Adu-Chr1 101739266 101742564 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g03062 59 331 C3H Transcription Factor Family AT1G11020 85.305 9.11e-165 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g03062 - - zju:107432369 530.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g03062 01 101739266 101742564 Adu01g03062 01 101739266 101742564 ECH