Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g03061 ATGGTTTCAATGTTCATGTGCACTAGTATTAATGGTGAAGAGAATCAAGAGATAGAATTTTCAAGGGATGGCAGTCACTACAGCCTCTCCAATGCGGTCTTGCCTTCTCTTGGTGCCAGAAGTCACCGCAGAGTCAAGCTTCGACGCTTCACTGTTTCTCCTTATGACCGTCGTTACAGGATATGGCAGACTTTCCTGGTCATCCTTGTTATCTACACAGCTTGGGTATCACCATTTGAATTTGGTTTCCTTAAGAAACCAGAAGCACCCCTTTCCTATACAGATAATGTTGTCAATGCACTCTTTGCTATGGATATAATTCTCACCTTCTTTGTAGCTTATATTGACAAAGCTACTTATTTACTAATTGATGATCGAAAACAAATTGCTTGGAAATACACAAGAACTTGGCTTGCATTTGATTTGATTTCTATCATTCCTTCAGAGCTTGTTAGAAAGCTGTCACCTGCACCTCTGCAGACTTATGGCCTATTCAACATGCTCCGTCTATGGCGTCTTCGAAGAGTTAGTGCATTGTTTTCAAGGTTGGAAAAGGACAAAAGCTATAACTATTTTTGGGTTCGATGTGCCAAACTTATCTGTGTTACCCTATTTGCTGTACATTGTGCTGCATGCTTTTATTATCTTATCGCGGCTCGTTATCGTGATCCCAAAAGGACATGGATTGGAGCAACAATGGGAAATTTTCTTCAGAAGAGCTTGTGGACAAGATATGTTACATCTATTTATTGGTCAATTACTACCTTAACAACTGTTGGCTATGGAGATCTGCATCCAGTTAATTCAAGAGAGATGGTCTTTGACATCTTTTACATGCTTTTTAATTTGGGACTTACTGCATATTTGATTGGTAACATGACTAACTTAGTTGTCCATGGAACAAGCCGAACCCGAAAATTTAGAGACACCATACAAGCTGCCTCAAGTTTTGCTCAAAGGAATCAATTACCTATTCGTTTGCAAGACCAGATGCTTGCTCATTTGTGTTTGAAGTTTAGAACAGACTCCGAAGGGTTACAACAACAAGAGACAATTGATTCCCTTCCTAAAGCCATCAGATCAAGCATTTCACATTATCTCTTCTATTCTCTGGTGGATAAAGTCTATTTATTTCGAGGCGTTTCAAATGATTTACTCTTTCAATTGGTTTCAGAGATGAAAGCAGAGTATTTTCCTCCTAAAGAAGATGTAATCTTACAGAATGAAGCTCCAACTGATTTCTACATACTAGTCACTGGTGCTGTGGAATTGGTAGTTCTTAAAAATGGCGTTGAGCAGGTTGTTGGAGAGGCAAATACAGGTGATCTTTTTGGTGAGATTGGTGTGCTTTGCTATAAGCCACAGCTCTTTACGGTTCGGACAAAGCGATTAAGCCAGCTTTTGAGACTAAACCGTACTGCTTTTCTAAATATTGTCAAGGCTAACGTAGGAGATGGAAATATTATTATGAACAATCTTCTTCAGCACTTAAAAGAACTAAATGACCCTATCATGGAGGGAGTTTTGGTGGAGACTGAGAATATGTTAGCTCGTGGTAGAATGGACCTACCAGTTGGTCTTTGTTTTGCAGCAGCAAGAGGAGATGACTTGTTGTTACATCATTTGTTAAAACGAGGATTGGATTCAAACGAATCAGATAGAAATGGAAGAACAGCTTTGCATATTGCAGCATCTAAAGGAAGTGAGAATTGTGTCATGCTTTTACTGGATTATGGAGCGGATCCCAATATTAGAGACTCTGATGGCAGCGTATCACTATGGGAAGCCATATTGGGTGGACATGAATCAGTAAGCCAGCTACTATTGGAAAATGGTGCTAACTTGAAAAGTGGTGATGTTGGTCAATTTGCATGCATCGCTGCTGAACAAAACACCCTCAACTTGCTCAAGGATATAGTGCGCTATGGTGGAGATGTCACGCTCCCTAGCACCACCTCCGGAACCACAGCTCTACATGTTGCAGTCTCTGAAGACAACGTAGAAGTTGTGAAGTTCTTGTTGGATCTTGGTGCCGACATTGATAAACCAGATAAGAACGGTTGGACACCAAGAGATCTAGCAGTCCAGCAAGGGCATCAAGACATCATAGCCATTTTTGAGTCTATTAAGGAGCCTAAGAATTGTCAACCTTTGGACCGTATTCCTGAGAAGGAAGGTAAGATAAAGAAGTTCCTTGGAAGATTTACAAGTGAACCAGCAATTCCTCTACCCCAAGAGAGCACATTTAGGGGTTCGGATGGGTTTAGGAGTTCGGACAGGTCTTGGAGCCAAAGCCGCCCAAGGCGGAGAAGCAGCAATAACTTCCACAACTCTTTGTTTGGGATAATATCAGCAGCAAACAAAGGGGAAAAGGACACGCTCTTTTATGTGAATGAAAATGGTAATGCAAAGAATGGTATGAAGAGTAGAGAATGGCCAACCAGAGTGGTGGTTAGTTTCCCTGAAAAGGGTGAGGCTGGTGGGAAACTTGTGTTGCTACCTGGAAGCTTTCAGGAGTTACTTGATATTGGGGCTGAGAAGTTTGGTGTGCGTCCTGCTAAGGTTCTATGCAAAGATGGGTTTGAAATTGAAGATATAGAGGTTATTAGGGATGGGGATCATCTTGTTTTTGAGAGTGCTGCTCAAAACTCTGACTATCCTACACCCACAATCGGTGTGCAACCGTAG 2688 0.4137 MVSMFMCTSINGEENQEIEFSRDGSHYSLSNAVLPSLGARSHRRVKLRRFTVSPYDRRYRIWQTFLVILVIYTAWVSPFEFGFLKKPEAPLSYTDNVVNALFAMDIILTFFVAYIDKATYLLIDDRKQIAWKYTRTWLAFDLISIIPSELVRKLSPAPLQTYGLFNMLRLWRLRRVSALFSRLEKDKSYNYFWVRCAKLICVTLFAVHCAACFYYLIAARYRDPKRTWIGATMGNFLQKSLWTRYVTSIYWSITTLTTVGYGDLHPVNSREMVFDIFYMLFNLGLTAYLIGNMTNLVVHGTSRTRKFRDTIQAASSFAQRNQLPIRLQDQMLAHLCLKFRTDSEGLQQQETIDSLPKAIRSSISHYLFYSLVDKVYLFRGVSNDLLFQLVSEMKAEYFPPKEDVILQNEAPTDFYILVTGAVELVVLKNGVEQVVGEANTGDLFGEIGVLCYKPQLFTVRTKRLSQLLRLNRTAFLNIVKANVGDGNIIMNNLLQHLKELNDPIMEGVLVETENMLARGRMDLPVGLCFAAARGDDLLLHHLLKRGLDSNESDRNGRTALHIAASKGSENCVMLLLDYGADPNIRDSDGSVSLWEAILGGHESVSQLLLENGANLKSGDVGQFACIAAEQNTLNLLKDIVRYGGDVTLPSTTSGTTALHVAVSEDNVEVVKFLLDLGADIDKPDKNGWTPRDLAVQQGHQDIIAIFESIKEPKNCQPLDRIPEKEGKIKKFLGRFTSEPAIPLPQESTFRGSDGFRSSDRSWSQSRPRRRSSNNFHNSLFGIISAANKGEKDTLFYVNENGNAKNGMKSREWPTRVVVSFPEKGEAGGKLVLLPGSFQELLDIGAEKFGVRPAKVLCKDGFEIEDIEVIRDGDHLVFESAAQNSDYPTPTIGVQP 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g03061 895 SMART ANK_2a 522 551 IPR002110 GO:0005515
Adu01g03061 895 SMART ANK_2a 686 715 IPR002110 GO:0005515
Adu01g03061 895 SMART ANK_2a 588 617 IPR002110 GO:0005515
Adu01g03061 895 SMART ANK_2a 555 584 IPR002110 GO:0005515
Adu01g03061 895 SMART ANK_2a 653 682 IPR002110 GO:0005515
Adu01g03061 895 Pfam KHA, dimerisation domain of potassium ion channel 815 877 IPR021789 -
Adu01g03061 895 Pfam Ankyrin repeats (3 copies) 626 705 IPR002110 GO:0005515
Adu01g03061 895 Pfam Ankyrin repeats (3 copies) 527 617 IPR002110 GO:0005515
Adu01g03061 895 ProSiteProfiles Ankyrin repeat profile. 555 587 IPR002110 GO:0005515
Adu01g03061 895 ProSiteProfiles KHA domain profile. 815 895 IPR021789 -
Adu01g03061 895 CDD CAP_ED 377 482 IPR000595 -
Adu01g03061 895 MobiDBLite consensus disorder prediction 750 770 - -
Adu01g03061 895 SUPERFAMILY Ankyrin repeat 527 708 IPR036770 -
Adu01g03061 895 Pfam Cyclic nucleotide-binding domain 397 481 IPR000595 -
Adu01g03061 895 SUPERFAMILY Voltage-gated potassium channels 54 298 - -
Adu01g03061 895 ProSiteProfiles Ankyrin repeat region circular profile. 555 586 - -
Adu01g03061 895 SMART cnmp_10 377 494 IPR000595 -
Adu01g03061 895 ProSiteProfiles Ankyrin repeat region circular profile. 653 685 - -
Adu01g03061 895 ProSiteProfiles Ankyrin repeat profile. 653 685 IPR002110 GO:0005515
Adu01g03061 895 MobiDBLite consensus disorder prediction 741 770 - -
Adu01g03061 895 Gene3D - 61 298 - -
Adu01g03061 895 SUPERFAMILY cAMP-binding domain-like 302 497 IPR018490 -
Adu01g03061 895 Pfam Ion transport protein 60 304 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Adu01g03061 895 ProSiteProfiles Ankyrin repeat profile. 588 620 IPR002110 GO:0005515
Adu01g03061 895 Gene3D - 524 708 IPR036770 -
Adu01g03061 895 ProSiteProfiles cAMP/cGMP binding motif profile. 377 479 IPR000595 -
Adu01g03061 895 PRINTS EAG/ELK/ERG potassium channel family signature 72 79 IPR003938 GO:0005249|GO:0006813|GO:0016020
Adu01g03061 895 PRINTS EAG/ELK/ERG potassium channel family signature 95 105 IPR003938 GO:0005249|GO:0006813|GO:0016020
Adu01g03061 895 PRINTS EAG/ELK/ERG potassium channel family signature 106 115 IPR003938 GO:0005249|GO:0006813|GO:0016020
Adu01g03061 895 PRINTS EAG/ELK/ERG potassium channel family signature 245 262 IPR003938 GO:0005249|GO:0006813|GO:0016020
Adu01g03061 895 PRINTS EAG/ELK/ERG potassium channel family signature 271 282 IPR003938 GO:0005249|GO:0006813|GO:0016020
Adu01g03061 895 PRINTS EAG/ELK/ERG potassium channel family signature 289 298 IPR003938 GO:0005249|GO:0006813|GO:0016020
Adu01g03061 895 PANTHER POTASSIUM CHANNEL AKT1 5 882 IPR045319 GO:0005249|GO:0006813
Adu01g03061 895 Gene3D Jelly Rolls 341 502 IPR014710 -
Adu01g03061 895 PANTHER K+ TRANSPORTER 1-RELATED 5 882 - -
Adu01g03061 895 PRINTS Ankyrin repeat signature 556 571 IPR002110 GO:0005515
Adu01g03061 895 PRINTS Ankyrin repeat signature 669 683 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g03061 Adu-Chr1 101732544 101738982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g03061 11 877 Ion Channels AT2G25600 62.500 0.0 1097
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g03061 K21867 - gmx:100819491 1385.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g03061 01 101732544 101738982 Adu01g03061 01 101732544 101738982 ECH