Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g03054 ATGGAGGACAGAAAAGTCAACACAATAGCCATCGTATCAGTGGTAACACTGATCATAGTGATCATGGTTGCTCGCATCGCGTTGAAGCTCTCAAAGGCCTTCTTCCTCATATGCGGTGCTGACGTGGCCGTGATCGTGGCCATCTTCTCCTTCGTCCTAATCAGAAACCGTTACAACAAACGGAGGAAGCAGTTAGAGTCACGGTTCAAGTCAGAAGGGAGAGAGCTCCGAATAGAGTACAGCTTCTTGCGCAAAGTGGCGGGCGTCCCAACTAAATTCCGTTACACGGAGCTCGAGGAAGCAACCGACGGTTTTCAAGCACTTCTTGGAAAAGGCTCCTCCGCAACGGTCTTCAAAGGGATCCTCAGCGACGGAACTTCCGTTGCCGTGAAGCGAATCGACGACGGAGCCGAAAGAGGCGAAAGAGAGTTCAGATCAGAGGTTGCAGCCATTGCTAGCGTTCAACACGTCAACCTCGTGCGTTTATATGGTTACTGCAATGCTCCTTCTTCACCAAGGTACCTTGTTTACGAGTACATATCAAACGGTTCGTTAGATTCTTGGATTTTTCCGAAAAAGGAAAGTGACAATAGTAGAAGAAGAGTTGGAGGGTGTTTGCCTTGGAGCTTAAGGTACAAAGTGGCAATCGATGTGGCGAAAGGACTTAGCTACCTCCACCATGATTGCAGGGCAAGGATTCTTCACCTTGATGTGAAGCCAGAGAATATACTCTTAGATGAGGGCTACAGAGCAGTTGTGGCGGATTTCGGGCTTTCGAAGCTGGTTGGAAAGGATGTTAGTCAAGTTATGACAACATTGAGAGGAACAAGAGGGTATTTAGCGCCTGAGTGGCTCTTGGAAAGAGGGGTTTCGGAGAAGACTGATATCTATAGCTATGGGATGGTTTTGTTGGAGATGATTGGAGGGAGAAGGAATGTTTGTAAGGTGGAAGATCCAAAGGACAAGAGTAAGAAGAAGTTGCAGTTTTTTCCAAAGATTGTGAATGAGAAAGTGAGGGAAGGGAAGTTGATGGAGATTGTGGATGAGAGATTACTGGTGGAGGGGGGTGGTGGTGTTGAGGAGAGTGAGGTGGTTAGGTTGGTGAATGTTGCATTGTGGTGCATACAAGAGAGGCCACGAATGAGGCCTAGTATGGCACAAGTTGCTGATATGCTTGAAGGGCGTGTCACAGTTGAGGAGCCACCAGATAGTAGAATGGTGCTTGTTGATTTGATATCTGAAGATGAAGATAACCCTGCAGTGCTGGATCACAATCAGAATAACATGGCAAGGTTATTGACATCTATGTCTAGTCATGAAGATTGTTCATCAACCTACTCAATGGGAACTACCACTATTCTATCTGGTAGATAG 1374 0.4672 MEDRKVNTIAIVSVVTLIIVIMVARIALKLSKAFFLICGADVAVIVAIFSFVLIRNRYNKRRKQLESRFKSEGRELRIEYSFLRKVAGVPTKFRYTELEEATDGFQALLGKGSSATVFKGILSDGTSVAVKRIDDGAERGEREFRSEVAAIASVQHVNLVRLYGYCNAPSSPRYLVYEYISNGSLDSWIFPKKESDNSRRRVGGCLPWSLRYKVAIDVAKGLSYLHHDCRARILHLDVKPENILLDEGYRAVVADFGLSKLVGKDVSQVMTTLRGTRGYLAPEWLLERGVSEKTDIYSYGMVLLEMIGGRRNVCKVEDPKDKSKKKLQFFPKIVNEKVREGKLMEIVDERLLVEGGGGVEESEVVRLVNVALWCIQERPRMRPSMAQVADMLEGRVTVEEPPDSRMVLVDLISEDEDNPAVLDHNQNNMARLLTSMSSHEDCSSTYSMGTTTILSGR 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g03054 457 PANTHER RECEPTOR-LIKE KINASE 1 457 - -
Adu01g03054 457 Gene3D Transferase(Phosphotransferase) domain 1 180 407 - -
Adu01g03054 457 SUPERFAMILY Protein kinase-like (PK-like) 85 393 IPR011009 -
Adu01g03054 457 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 1 457 - -
Adu01g03054 457 Gene3D Phosphorylase Kinase; domain 1 64 179 - -
Adu01g03054 457 Coils Coil 55 75 - -
Adu01g03054 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672|GO:0006468
Adu01g03054 457 ProSitePatterns Protein kinases ATP-binding region signature. 109 131 IPR017441 GO:0005524
Adu01g03054 457 ProSiteProfiles Protein kinase domain profile. 103 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g03054 457 SMART serkin_6 103 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g03054 457 Pfam Protein kinase domain 108 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g03054 Adu-Chr1 101562915 101564523 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g03054 1 404 Receptor kinase-like Gene Family AT5G20050 66.256 0.0 521
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Adu01g03054 Pkinase 7.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g03054 - - gmx:100779485 691.804