Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g03048 ATGGCTACCACCATCATCACCACACCCTCAAGAGATAATAATAATGAACCTGACTACGACAGCAGCTCCTCCTCCGTCACCACCACCACCACCCTCCCTGAATCCACCCGCAGCTGGATGAGCAACCTCAGCTTCAGCAGCCTCCGCCGCCAGAGCTCTGTCTCTGTTTTCTCCTCGTCCTCCGCCATCACAGACACCCCTTTGTTTCTGACTTCTTCTTCTCTCCAAAGCAAGCCGCACAAGGCGAACCAAGTTGCATGGGAGGCCATGCAGCGGCTCCTCAGCCACCACGGGCGCGTGGGGCTCGACCACTTCCGGTTGCTGAGGCGGCTGGGGAGCGGCGACATAGGGAACGTGTACCTTTGCCAGATAAGGAACCCGGTGGTGGGGCTTCCGCAGTGCTTCTACGCCATGAAGGTTGTGGACAGAGAAGCACTTGCCATAAGGAAGAAGCTTCATAGAGCGGAGATGGAGAAGGAGATTCTTGGAATGCTTGATCACCCTTTCTTGCCAACTTTGTACACTCAGTTTGAAGCTTCTCACTACTCTTGCTTGCTCATGGAGTTCTGCCCCGGCGGCGATTTATACGCCGCTCGACAACGCCAGCCCGGCAAGCGCTTCTCCATTGCTTCCGCTAAGTTCTATGGAGCGGAGACACTTTTGGCGGTAGAATATCTTCACATGATGGGGATAGTGTACAGGGATTTGAAGCCGGAGAACGTTCTGGTGAGGGAAGACGGCCACATAATGCTATCGGATTTCGATCTCTCTCTCAAATGCGACGTCGTTCCCAAGCTCCTAAGGACCAAAACTACCACCAGATTGGAACGCACCATTAAGTCCACAAAGACCAGATCCTGCGCCACCGCACCCATCCAACCAGTACTCTCATGCTTCTCCCTATCTTCATCAAGAAACAAGAAACGTTCCCCGACCGTTACAACCGTCATAACAGAAAACGCTAACCACGTTCAAGAACTCGATCCAGAGCTCGTAGCGGAGCCAATAGAAGCAAGGTCGAAATCGTTCGTGGGAACGCACGAGTATTTGGCGCCGGAAGTGATCTTAGGTCAAGGCCATGGCAGCGCCGTGGATTGGTGGACTTTCGGAGTGTTCTTGTATGAGATGCTGTACGGAAGAACGCCGTTCAAAGGCGAGAATAATGAGAAGACGCTGTTGAATATTCTCAAGATGCCGTTGGTTTTTCCAAGGATTGCGGTTACTAGTAGCAAGGAGTATGAGGAGATGGTGAAGGTTCAAGATCTTATAAGCAAGCTTTTGGTGAAGAATCCAAACAAGAGGATTGGCAGTTGCATGGGTTCTCTTGAGATTAAGAGGCATGACTTCTTTAAGCCTGTTAATTGGGCTTTGATTAGGTCTATTAAGCCACCCGAGGTGCCTAATCATATCAATAATAACATCCTTAGGAGTAGGGTTTTCATGCCTAGTAGATTAACCAAGAAAGAAAGAGATCAACCCTATAAGCTTAGTCATCATCATTTTGAATACTTCTAA 1515 0.501 MATTIITTPSRDNNNEPDYDSSSSSVTTTTTLPESTRSWMSNLSFSSLRRQSSVSVFSSSSAITDTPLFLTSSSLQSKPHKANQVAWEAMQRLLSHHGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPVVGLPQCFYAMKVVDREALAIRKKLHRAEMEKEILGMLDHPFLPTLYTQFEASHYSCLLMEFCPGGDLYAARQRQPGKRFSIASAKFYGAETLLAVEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSLKCDVVPKLLRTKTTTRLERTIKSTKTRSCATAPIQPVLSCFSLSSSRNKKRSPTVTTVITENANHVQELDPELVAEPIEARSKSFVGTHEYLAPEVILGQGHGSAVDWWTFGVFLYEMLYGRTPFKGENNEKTLLNILKMPLVFPRIAVTSSKEYEEMVKVQDLISKLLVKNPNKRIGSCMGSLEIKRHDFFKPVNWALIRSIKPPEVPNHINNNILRSRVFMPSRLTKKERDQPYKLSHHHFEYF 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g03048 504 SUPERFAMILY Protein kinase-like (PK-like) 79 482 IPR011009 -
Adu01g03048 504 Gene3D Phosphorylase Kinase; domain 1 103 189 - -
Adu01g03048 504 ProSiteProfiles Protein kinase domain profile. 105 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g03048 504 Pfam Protein kinase domain 106 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g03048 504 Pfam Protein kinase domain 340 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g03048 504 PANTHER FLIPPASE KINASE 1-RELATED 13 504 - -
Adu01g03048 504 Gene3D Transferase(Phosphotransferase) domain 1 190 259 - -
Adu01g03048 504 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672|GO:0006468
Adu01g03048 504 CDD STKc_phototropin_like 103 467 - -
Adu01g03048 504 SMART serkin_6 105 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g03048 504 MobiDBLite consensus disorder prediction 1 33 - -
Adu01g03048 504 Gene3D Transferase(Phosphotransferase) domain 1 323 468 - -
Adu01g03048 504 PANTHER PROTEIN KINASE PINOID 2 13 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g03048 Adu-Chr1 101520332 101522049 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g03048 14 504 AGC Kinase Gene Family AT2G26700 58.627 0.0 592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Adu01g03048 Pkinase 1.6e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g03048 K08286 - gmx:100777988 726.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g03048 01 101520332 101522049 Adu01g03048 01 101520332 101522049 ECH