Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g03032 ATGCATTCCCAGGTTCAAGAAAGAGTAAATGCTGAAGTTAAGAGTGAAAGGAAAGTAATTAAGGCAACCAAGCACTTCTTCTGCCCCCGCGCCACGTGGCAAGGGTCGTGCCGGTTACTCAACCGCCCCTTCCGGTGCTTCAACTTCGACGCGTACGAATCTGTACCGGTGGAGGTTAGCGGCGACGAAGTTCCCCTGCCGGTGGAATCGTTCATGGAAACCGATTTCCACCAAGTTCTGAAGACGAACATCGAGCGGTGCAAGTACGTGAAGCCTACGCCGATTCAGCGACACGCCATTCCCATTGCTTCCGCCGGCCGTGACTTGATGGCGTGCGCGCAGACTGGGTCCGGTAAAACGGCGGCGTTTTGCTTCCCGATCATTTCTGTTATTCTTAAGAATCGTCGTCCGGGGTTTAATTCTGTGGTTCGTGATCGTGGCGGCACTGTTTCATATCCAACGGCACTTATTCTTTCTCCTACTAGAGAATTATCCTGCCAGATACATGATGAAGCGAAGAAGTTTGCTCATCAAACTGGAGTGAAGGTTGTTGTTGCTTATGGTGGAGCTGCAATAACTCAGCAGCTGCGGAATTTAGAGAAGGGTGTTGATATACTTGTTGCTACTCCTGGGAGGTTGGTGGATATCATTGAAAGAGGGAGGGTTTCTTTGACAAGGATAAAGATTCTTGCTTTGGATGAGGCTGATCGAATGTTGGACATGGGATTTGAGCAGCAGATACGCAAGATTGTTGAGCAGATGGACATGCCTCCACCTGGTGTTAGGCAAACTATGCTTTTCAGCGCTACATTCCCTGATGATATTCAGAAGCTTGCATCTGACTTTCTATCAAACTACATATTCCTATCTGTTGGAAGGGTTGGTTCTAGCACTGAATTGATTGTGCAGAAAGTTGAATATGTTGAGGATAATGAAAAGATTAACCATCTAGTGGATCTACTCCATGGTCAAAATGCACGTGGCGCCAACGGGAAGCCTGCTTTGACTCTTGTATTTGTTGAAACAAAGAGGGGAGCGGATATTTTAGAATCTACCTTGACGAGAAAAGGGTTTCGTGCTATTGCAATACATGGTGACAAAGTTCAAATGGAAAGGGAACGAGCTTTAAGATCCTTCAAAAAAGGTGCGACTCCTATCATGGTGGCGACAGATGTTGCTTCCAGAGGTTTGGATATCCCGCATGTGGCCCATGTCATCAATTATGATTTGCCAAGAAACATTGATGACTATGTTCATAGAATTGGCAGAACTGGCCGTGCTGGCAAATCTGGTTTTGCCACTGGCTTCTTCAGCTACAAGAACAATCATCTTGCAAAGCCTCTTGTTGACCTCTTGCAGGAAGCAAAGCAAGAAATTCCTTCTTGGCTGAGCCAATATGCTGGTGAGTCTTCACCATATGATGGCACTGGTGGTAGCCATCCATCTCAGCAGTATGGTGGCCGTGACTTCCGAAATGTTACTGAACCTGAAGTGGAGAATTATGACAACCACTCCACTACTTTTGGCGATTCATATAATGCTGATTATACATTTGACATAAAAGACTCCAATGAATATGCTGATTCGTCATCTTATGAGATGGCAAATTCAGTTCCTCCTGCTACCAGTTGTCATTATACTTATGCCAATACTGACTTGTATGGAGGTGGCAACGTTGAAGATGGTCCTGGAGGTTATGCATCGATTGTTGCAACTGGATGGGACTAG 1728 0.4595 MHSQVQERVNAEVKSERKVIKATKHFFCPRATWQGSCRLLNRPFRCFNFDAYESVPVEVSGDEVPLPVESFMETDFHQVLKTNIERCKYVKPTPIQRHAIPIASAGRDLMACAQTGSGKTAAFCFPIISVILKNRRPGFNSVVRDRGGTVSYPTALILSPTRELSCQIHDEAKKFAHQTGVKVVVAYGGAAITQQLRNLEKGVDILVATPGRLVDIIERGRVSLTRIKILALDEADRMLDMGFEQQIRKIVEQMDMPPPGVRQTMLFSATFPDDIQKLASDFLSNYIFLSVGRVGSSTELIVQKVEYVEDNEKINHLVDLLHGQNARGANGKPALTLVFVETKRGADILESTLTRKGFRAIAIHGDKVQMERERALRSFKKGATPIMVATDVASRGLDIPHVAHVINYDLPRNIDDYVHRIGRTGRAGKSGFATGFFSYKNNHLAKPLVDLLQEAKQEIPSWLSQYAGESSPYDGTGGSHPSQQYGGRDFRNVTEPEVENYDNHSTTFGDSYNADYTFDIKDSNEYADSSSYEMANSVPPATSCHYTYANTDLYGGGNVEDGPGGYASIVATGWD 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g03032 575 Gene3D - 291 470 IPR027417 -
Adu01g03032 575 CDD SF2_C_DEAD 301 437 - -
Adu01g03032 575 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 313 467 IPR001650 -
Adu01g03032 575 CDD DEADc_DDX3_DDX4 70 295 IPR044763 GO:0003724|GO:0005524
Adu01g03032 575 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 100 289 IPR014001 -
Adu01g03032 575 Pfam DEAD/DEAH box helicase 93 278 IPR011545 GO:0003676|GO:0005524
Adu01g03032 575 Pfam Helicase conserved C-terminal domain 312 428 IPR001650 -
Adu01g03032 575 Gene3D - 44 290 IPR027417 -
Adu01g03032 575 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 37-LIKE ISOFORM X1 44 503 - -
Adu01g03032 575 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 69 97 IPR014014 GO:0003724
Adu01g03032 575 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 44 503 - -
Adu01g03032 575 SMART helicmild6 347 428 IPR001650 -
Adu01g03032 575 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 442 IPR027417 -
Adu01g03032 575 SMART ultradead3 88 304 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g03032 Adu-Chr1 101301485 101304581 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g03032 67 460 Eukaryotic Initiation Factors Gene Family AT3G19760 31.899 2.06e-59 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g03032 K11594 - gmx:100791226 720.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g03032 01 101301485 101304581 Adu01g03032 01 101301485 101304581 ECH