Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g03016 ATGGGTAAAGGCAACCCACAGAGAAGAAGCACCGGCGACGAGCTCCATACGGCGGCAAGGTCCGGTGATCTCGTCGCTATTCAGATGATTTTGACTTCAAACCTTTTGGCTGTTAATTCTAGAGACAAGCATTCGAGAACACCAGTTGTGCTGCATGTTTTATCTGAAAATGATTTGATAGTAAGTTATCTGTGCAAGAATAAGGCTGATGTTGGTGCTTCTGCTATGGATGACATGGCCGCAATACACTTTGCCACTCAGAAGAGGCATTTGGAAGTTGTTAAGGCTCTAGTTGCAGCTGGTGCATCCATCAAGGCTTGTACTTGCAAAGGCATGAATTCATTACACTACGCAGCTCAAGGTTTTCATCTGGAGCTTGTTAGGTACTTGGCCAAGAAAGGGGCGAGTCTTACTGCCAAGATAAGGGCAAGAAAGACTCCTTTGGATCTTGCTAACAATGAAGAAGTCCGCTCATTTTTGGAGGAATTCGAAAGATCAGCCAAAAACAGAGCATCTAGCAACAAAAATAAAGCTGAACAGTCTGATCCAAAAGCATCCATGTTGGAATTAGAAGATAATTCAAGTGCCAAACAACATGCAGTGGCTGTCGATGAAGAAAACGGTGACGGAGAGAAGAGAGAGACTAATGAGGATGACGAAAATAGTGATAGAGAGAAGAGGAAGGCTAACGAAGAGGACGCAAGAGAAGACTCATCACAATCAAAAAGGGTAAAAGTTAAGTTGAGCCATCTCCAAAGTTCAGATGATATCCAAGAAGAAGAAGAAGAAGACATGTAG 798 0.4323 MGKGNPQRRSTGDELHTAARSGDLVAIQMILTSNLLAVNSRDKHSRTPVVLHVLSENDLIVSYLCKNKADVGASAMDDMAAIHFATQKRHLEVVKALVAAGASIKACTCKGMNSLHYAAQGFHLELVRYLAKKGASLTAKIRARKTPLDLANNEEVRSFLEEFERSAKNRASSNKNKAEQSDPKASMLELEDNSSAKQHAVAVDEENGDGEKRETNEDDENSDREKRKANEEDAREDSSQSKRVKVKLSHLQSSDDIQEEEEEDM 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g03016 265 SUPERFAMILY Ankyrin repeat 15 156 IPR036770 -
Adu01g03016 265 ProSiteProfiles Ankyrin repeat profile. 110 142 IPR002110 GO:0005515
Adu01g03016 265 ProSiteProfiles Ankyrin repeat region circular profile. 110 140 - -
Adu01g03016 265 Gene3D - 9 186 IPR036770 -
Adu01g03016 265 ProSiteProfiles Ankyrin repeat region circular profile. 77 106 - -
Adu01g03016 265 PANTHER - 4 263 - -
Adu01g03016 265 SMART ANK_2a 44 73 IPR002110 GO:0005515
Adu01g03016 265 SMART ANK_2a 77 106 IPR002110 GO:0005515
Adu01g03016 265 SMART ANK_2a 110 139 IPR002110 GO:0005515
Adu01g03016 265 Coils Coil 212 232 - -
Adu01g03016 265 MobiDBLite consensus disorder prediction 167 186 - -
Adu01g03016 265 Pfam Ankyrin repeats (3 copies) 53 140 IPR002110 GO:0005515
Adu01g03016 265 MobiDBLite consensus disorder prediction 167 265 - -
Adu01g03016 265 MobiDBLite consensus disorder prediction 198 255 - -
Adu01g03016 265 PANTHER ANKYRIN REPEAT PROTEIN 4 263 - -
Adu01g03016 265 ProSiteProfiles Ankyrin repeat profile. 77 109 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g03016 Adu-Chr1 101024496 101025903 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g03016 15 160 Ion Channels AT2G25600 25.503 1.84e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g03016 - - ahf:112757970 313.923