Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g03010 ATGGCTTCAAACCGCATTCATGTTCTGTTCTTATGGCTGCCCTTTTGTGTGGCCCTGGCAGCTGAAGCTGCAGTTGAGAAAAGTATTTGGTCGGGTGATCTTCTTTCTCCTCCTGACAGTAACACTACAAACCCATCTTCTTGGGTATCAAGTTCTGGTCACTTTGCATTCGGCTTTTACCGTCACGGTAACGGCCACGGCTACGCCATTGGAATATGGCTAATAGCTGGAACCAACGAGACGGTTGTGTGGACCGCTAACCGTGACGACCCTCCAATCTCATCTAACTCCACCTTGCAATTAACCGTGGATGGCCTACTTCTGAAGCAAGGTAGTGATGCCCAAGGACAGGTCTATGTGGCTTCAGAGCCAGCAGGTTCCGCATCCATGCTTGATTCCGGTAACTTTGTGATCTATAGTCAAGAAAGTTCTTTCTTTGTTGTGTGGCAAAGCTTTCATCACCCAACTGACACCATATTAGGAGGCCAGAATTTAACTATTCTGAACCAGCTAGTCTCTAGCAGGTCCACTTCAGACCGTTCCACTGGACACTACTATCTTGCCTATCAGCGTGATAACAACCTTGTTGCTTATCCCGTCAATAGCTCCTCACAGCCTCTTGATGCTTACTGGGCTTCCATGGATTACTTCCCGTATATGATTGGGGTGGAACAGTTGAGTCTTGACACTAAAGGCAATCTTTGCTTCATTGCCCCTACTCAATGCCTGGCTACTAACACTCACCACCAAAACAAGCCGCAGAACACTAGCTCAATCTACCGCGCAACTCTTGATGTTGATGGAAACCTGAGATTGTATGAGCACCTATTTGAGGATGTGGAGGGGAGTACAATTACAAACTCACCATCATCATCATCACTTGTTCATACGTTGTGGCAAGCCTTCACAGATGAATGCCAAATCAAGGGGTTTTGCGGCTCCAACAGTTTCTGCTCCAACATAAGAGGCAATGCTAGATGCCAGTGTTATCCTGGTTTCGTCCCCTACAACACCAAAACCAGTTATAGTAATGCCATGTTTCTGGAGTGCAAACTGAACTACACCAAAGATGATTGCGAAAGAAGTGGTGGCCGAAACTATTTGTTGTATAACACTGTTTCCTTGGAGGAGATGCGGTGGGATGACTGCCCATATTGGGCTAAACCAATGAGCATGGAAGCTTGTAACAAGTCTTGCAAGGAGGATTGTGATTGTGGAGCAGCATTATACACAAATGGCCAATGCAACAAATATAGTCTTCCAGTCAGATATGGCAGAAAGGTTCCAAATGCATCAGACACAGGCATGGCACTCTTCAAGGTTCCTTCGGGATATGTCATCGGGAAAAACACAACCACCTCATCTCCCAAGAATCCTAATGCCATTGTTAATAACCAGAGAGGTCTGATACTGATTCTAGCCTCTACTTTGGGTTCCATTTCATTTCTCTGTGTGGTCTTTGTTGTGTCTATTTTCTTCATTTATAGGAGCCAAGTTCATAGATTTACAAAGCTCTCTGCAAGTTCAAATCTTGGATTCACCGAGGAATGTTCGCTACGCTCGTTTTCCTTTGATGAACTTGTCAAAGCAACTAGTGGCTTCACAGAGGAGGTAGGCAGAGGATCCTTCGGAGCAGTTTATAGAGGCACAATAGGAGAGAATAGCAAAAGGATTGCCGTCAAGAGAATAGAGAAGTTTGTTGATGAAGGGGAGAGGGAATTCCGAGCCGAAATCACTGCCATTTCTAGAACTCATCATAGGAATCTGGTTAAGCTCATTGGCTTCTGTATTGAGGGGTCAAGGAAGCTTCTTGTCTATGAATATGTCAGCAATGGATCTCTTGCGAATCTTCTCTTCAAGACTAAGAAGCATCTGCCATGGAAAGAGAGACTCAAAATTGCATTGGATGTGGCCAGAGGAGTCCAGTATCTACATGAAGAGTGTGAAGTTCGTATTGTCCATTGTAATCTGAAGCCTCACAATATACTAATGGATGAACTATTGACGGCTAAGATATCAGATTTCGGATTGGCAAGGCTATCAAAGCCGGAACTTTCGAGTATTAGACCGGACAAGAACGAGGTTAGAACCGGGTACTTAGCACCTGAATGGCAAAAGGAGGCATTGGCATCGGTTAAAGCTGATGTTTTCAGTTATGGGATAGTACTGTTGGAGATTGTATGCCGCAGAAGGAGTATAGAAGTAAATGTTCCATCACCGGAGGAGGTGCTTCTTTCTAGTTGGGCATATCATTGCTTTGCGACTGAGCAGTTACATAAACTTGTTGCTTACAATGAGGATGAAAAGCAAGACATGGATTGGAAAACACTGGAAAGAATGGTGAAGGTGGGGCTGCTGTGTGTTCAAGATGACCCATCTCTGCGTCCTTCAATGAGGAATGTCATTTTGATGTTGGAAGGATGGAAAGATGTTCCAATTCCCCCATCCCCATCCTGTTAG 2460 0.4484 MASNRIHVLFLWLPFCVALAAEAAVEKSIWSGDLLSPPDSNTTNPSSWVSSSGHFAFGFYRHGNGHGYAIGIWLIAGTNETVVWTANRDDPPISSNSTLQLTVDGLLLKQGSDAQGQVYVASEPAGSASMLDSGNFVIYSQESSFFVVWQSFHHPTDTILGGQNLTILNQLVSSRSTSDRSTGHYYLAYQRDNNLVAYPVNSSSQPLDAYWASMDYFPYMIGVEQLSLDTKGNLCFIAPTQCLATNTHHQNKPQNTSSIYRATLDVDGNLRLYEHLFEDVEGSTITNSPSSSSLVHTLWQAFTDECQIKGFCGSNSFCSNIRGNARCQCYPGFVPYNTKTSYSNAMFLECKLNYTKDDCERSGGRNYLLYNTVSLEEMRWDDCPYWAKPMSMEACNKSCKEDCDCGAALYTNGQCNKYSLPVRYGRKVPNASDTGMALFKVPSGYVIGKNTTTSSPKNPNAIVNNQRGLILILASTLGSISFLCVVFVVSIFFIYRSQVHRFTKLSASSNLGFTEECSLRSFSFDELVKATSGFTEEVGRGSFGAVYRGTIGENSKRIAVKRIEKFVDEGEREFRAEITAISRTHHRNLVKLIGFCIEGSRKLLVYEYVSNGSLANLLFKTKKHLPWKERLKIALDVARGVQYLHEECEVRIVHCNLKPHNILMDELLTAKISDFGLARLSKPELSSIRPDKNEVRTGYLAPEWQKEALASVKADVFSYGIVLLEIVCRRRSIEVNVPSPEEVLLSSWAYHCFATEQLHKLVAYNEDEKQDMDWKTLERMVKVGLLCVQDDPSLRPSMRNVILMLEGWKDVPIPPSPSC 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g03010 819 PANTHER S-RECEPTOR KINASE-LIKE PROTEIN 5 818 - -
Adu01g03010 819 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 5 818 - -
Adu01g03010 819 Gene3D - 32 153 IPR036426 -
Adu01g03010 819 CDD STKc_IRAK 538 807 - -
Adu01g03010 819 ProSitePatterns Protein kinases ATP-binding region signature. 538 561 IPR017441 GO:0005524
Adu01g03010 819 Pfam Protein tyrosine and serine/threonine kinase 534 803 IPR001245 GO:0004672|GO:0006468
Adu01g03010 819 ProSiteProfiles Bulb-type lectin domain profile. 34 151 IPR001480 -
Adu01g03010 819 ProSiteProfiles EGF-like domain profile. 302 339 IPR000742 -
Adu01g03010 819 PIRSF SRK 2 819 IPR024171 GO:0004674
Adu01g03010 819 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 213 IPR036426 -
Adu01g03010 819 Gene3D Transferase(Phosphotransferase) domain 1 609 812 - -
Adu01g03010 819 Pfam D-mannose binding lectin 81 168 IPR001480 -
Adu01g03010 819 Gene3D Phosphorylase Kinase; domain 1 495 608 - -
Adu01g03010 819 SMART blect_4 39 155 IPR001480 -
Adu01g03010 819 CDD EGF_CA 304 333 - -
Adu01g03010 819 SUPERFAMILY EGF/Laminin 303 339 - -
Adu01g03010 819 ProSiteProfiles Protein kinase domain profile. 532 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g03010 819 SUPERFAMILY Protein kinase-like (PK-like) 514 808 IPR011009 -
Adu01g03010 819 Gene3D - 155 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g03010 Adu-Chr1 100980908 100983729 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g03010 482 812 Receptor kinase-like Gene Family AT2G37710 38.348 4.97e-62 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Adu01g03010 PK_Tyr_Ser-Thr 4.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g03010 - - ahf:112707637 916.376