Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g03009 ATGAATACTCTTTCTGCAAGTGCCATTGGTATCTTCCTATTGCTCTTGTTCTTATGTTATGTAGGAAGAACAACAGAAACACAAGTTCCAGCTACAAACATAACACCAGGTTCCTTACTTCACCCTGCTACTTACCCTACTCACTGGTCCTCTTCTTCTGGCCAATTTGCATTTGGCTTTTATAAGCAAGGTAGTGGCTATGCCGTTGGAATCTGGTTGGTTGATGCGAAGAACAATACGGTGGTATGGACTGCAAACCGAGACGATCCACCAGTTACTTCAAATGCAACTCTACAGCTGACTGCACAAAGTAAATTTGTTGTGCAAACAGAGCAAGGAAAACAGAAGCTTATTGCCAAAGCAATTGCTTCCTCCGCTTCCATGCTCGATTCTGGAAACTTTGTACTATATAACCAGACTAAGGGTGTCATATGGCAGAGTTTCGATTACCCAACTGACACTATGTTGGGTGGTCAATCTCTACCTTCTGGAGGTCAATTGTTGTCTAGTTCTTCAGATACCAATCACTCAAGTGGACGATTTCGCCTCAAGATGCAGGATGATGGAGAATTCAGTCTGTATCCAGAATTCACAACTGACACGAGGAGGGATGCTTACTGGCCGTCAGATATATACCTTGGTGATAAGATAGTCAAAGGCAAAGCTTATCTTTACCTCAACAAAACAGGTTTGCTGGTGTCCAAGAATGGTAGCAATAGTGTTATTTCGAGCCATTATGGACCTTATTCTGGCGATAGTGTCGGCAGCAACCAGACCATTTATCGTGCAACCCTGGACCCTGATGGGGTTTTCAGGCTGTATGCTCATGATAAAGGTAGTGAGTCCAAGAAAGTTTCACAGTGGCCATGGGATGACGGATGTGAGGTAAAGGGTTACTGTGGCTTTAACAGCTACTGTACATTCAACGACGACAAACCGGACTGCTATTGTCTTGAAGGTTTCGACTTTATAGAGCCAGATCAACGCACTCTTGGCTGCAAAAGGAACTTCTCAATTGCAGAGTGTAGAGGTGAGAAAGGCAGCGCAGCTGCACCCTATTATAACATGGTCACAATGCTAGATATTCAATGGGAGGATCACGCTTATTTTGGGGCCTATATGGAGCACCAAGAAGAATGCTCTGATTCTTGTTTGGCTGATTGCAACTGTTGGGGTGCCCTTTATGAGAACGGGAACTGCTTGAAACAAGGGATGCCTTTCAGATATGTCTCAAGGAGAGTTGAAGGGTTCTCAGCCAACACAATGTTCTTAAAGGTGGGAAATATCACCCATAAAAACAGGAATCCTAATGATGTATTCATGCCTCTCCCAATCAGGAGTACTAGCAACAAAGCAGTTGTCACTATCATTGTCATCACATCGGTGTTCACTCTTCTTTTATGCTCAATGATCGCCATCTCTTGCCACCTGATTTACAAGATTCGAGTTCTAAGGCTTCAGAGGCAGATGGAGACTGGGAACTTAGGCCTAAATGAAGAAGTGGCCTTGAGAAGATTTTCATACAGTGAACTGAAGCGGGCAACAAATGGTTTCAAGCAAGAGCTGGGTAAGGGTTCTTTTGGAGCAGTCTACAAAGGCAGCTTATACAAAAGTAGAAGATCCATTGCAGTGAAGAGACTAGAGAAGCTAGTTGAAGAAGGAGAAAGAGAGTTCCAAGCAGAGGTGCGAGCCATCGGAAAAACACATCACAGGAACCTTGTTCGCTTGCTGGGATTTTGTGCCGAGGGTCCCAAGAGGCTTCTGGTCTATGAATACATGAGTAATGGTTCCCTTGGAAAGCTCATCTTTGGGGGTGAAAAGCGTCCAGATTGGGATGAGAGAGTGAGAATAGCACTGGATATTGCAAGAGGGATCCTTTATCTCCATGAAGAGTGTGAGGCACCCATTATTCACTGTGACATAAAGCCTCAAAATATCTTGATGGATGAATTTTGGACCGCAAAAATATCTGATTTTGGTCTAGCAAAACTCTTAATGCCAGATCAAACAAGAACCTTCACAGGGATTAGAGGGACAAGAGGGTATGTGGCTCCAGAATGGCACAAGAACACCCCAATATCAGTGAAGGCAGATGTTTACAGCTATGGTGTTGTGCTGCTGGAAGTTATATGCTGCAGAAGGAACATCGAAATTAGTGTTTCTGTACCAGAGGAGATTCTTCTCTCTAGCTGGACCTATAACTGCTTTGTTGCTAAAGAGTTGCATAAGCTAGTTCCCAGGGAAATAGTGGATAAGAATGTTTTGGAAAATATGGTGAAGGTGGCACTATGGTGTATCCAAGATGAGCCTGCTCTCCGGCCAACAATGAAGAGTGTGGTGTTGATGTTAGAAGGGGTTACTGATGTAGCTATTCCTCCTTGTCCAACAACCTCTATTTCTATGTAA 2406 0.4385 MNTLSASAIGIFLLLLFLCYVGRTTETQVPATNITPGSLLHPATYPTHWSSSSGQFAFGFYKQGSGYAVGIWLVDAKNNTVVWTANRDDPPVTSNATLQLTAQSKFVVQTEQGKQKLIAKAIASSASMLDSGNFVLYNQTKGVIWQSFDYPTDTMLGGQSLPSGGQLLSSSSDTNHSSGRFRLKMQDDGEFSLYPEFTTDTRRDAYWPSDIYLGDKIVKGKAYLYLNKTGLLVSKNGSNSVISSHYGPYSGDSVGSNQTIYRATLDPDGVFRLYAHDKGSESKKVSQWPWDDGCEVKGYCGFNSYCTFNDDKPDCYCLEGFDFIEPDQRTLGCKRNFSIAECRGEKGSAAAPYYNMVTMLDIQWEDHAYFGAYMEHQEECSDSCLADCNCWGALYENGNCLKQGMPFRYVSRRVEGFSANTMFLKVGNITHKNRNPNDVFMPLPIRSTSNKAVVTIIVITSVFTLLLCSMIAISCHLIYKIRVLRLQRQMETGNLGLNEEVALRRFSYSELKRATNGFKQELGKGSFGAVYKGSLYKSRRSIAVKRLEKLVEEGEREFQAEVRAIGKTHHRNLVRLLGFCAEGPKRLLVYEYMSNGSLGKLIFGGEKRPDWDERVRIALDIARGILYLHEECEAPIIHCDIKPQNILMDEFWTAKISDFGLAKLLMPDQTRTFTGIRGTRGYVAPEWHKNTPISVKADVYSYGVVLLEVICCRRNIEISVSVPEEILLSSWTYNCFVAKELHKLVPREIVDKNVLENMVKVALWCIQDEPALRPTMKSVVLMLEGVTDVAIPPCPTTSISM 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g03009 801 Pfam Protein kinase domain 519 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g03009 801 Gene3D - 28 149 IPR036426 -
Adu01g03009 801 Gene3D - 151 285 IPR036426 -
Adu01g03009 801 SUPERFAMILY alpha-D-mannose-specific plant lectins 173 279 IPR036426 -
Adu01g03009 801 SMART serkin_6 516 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g03009 801 PIRSF SRK 3 801 IPR024171 GO:0004674
Adu01g03009 801 ProSiteProfiles Bulb-type lectin domain profile. 36 149 IPR001480 -
Adu01g03009 801 Coils Coil 544 564 - -
Adu01g03009 801 CDD STKc_IRAK 522 785 - -
Adu01g03009 801 Gene3D Phosphorylase Kinase; domain 1 482 592 - -
Adu01g03009 801 Gene3D Transferase(Phosphotransferase) domain 1 593 790 - -
Adu01g03009 801 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE LECRK1 27 799 - -
Adu01g03009 801 PANTHER RUST RESISTANCE KINASE LR10-RELATED 27 799 IPR045874 GO:0004672
Adu01g03009 801 SUPERFAMILY Protein kinase-like (PK-like) 501 784 IPR011009 -
Adu01g03009 801 Pfam D-mannose binding lectin 80 161 IPR001480 -
Adu01g03009 801 ProSitePatterns Protein kinases ATP-binding region signature. 522 545 IPR017441 GO:0005524
Adu01g03009 801 Pfam S-locus glycoprotein domain 255 322 IPR000858 GO:0048544
Adu01g03009 801 ProSiteProfiles Protein kinase domain profile. 516 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g03009 801 SMART blect_4 40 151 IPR001480 -
Adu01g03009 801 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 211 IPR036426 -
Adu01g03009 801 ProSitePatterns Serine/Threonine protein kinases active-site signature. 636 648 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g03009 Adu-Chr1 100959849 100962456 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g03009 466 784 Receptor kinase-like Gene Family AT3G55550 39.879 1.81e-67 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Adu01g03009 Pkinase 2.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g03009 - - ahf:112707609 1533.47