Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g03007 ATGGCATCAACACCTGCTCTGTTATTGCTAGTGTTGTTGATGCTATTTGCAAATGAAACCACAGCTGAGACAAACCACACTCACCTCATTTCTATAGGGTCTGTGATATCTCCTACAGGCACGCACGCTTCATGGGCATCACGTTCTGGCCTCTTTGCTTTTGGCTTTTACCCCCATGGTAATAGCTATGCTGTTGGAATATGGCTGCTTAATCAACCTAACCACACAATTGTGTGGACTCATAATCGTGATAGTCCATCAGTGCCTTCAAATTCCACATTGAGATTGACCAAAGAAGGCGGGCTACTTCTTCTGCAAGGAAATGAAGACCCAGAGTTTCTCACTCCACTTTATTATTTATATCAGGCTAAAGTAGAAGTGGCTTCAGCATCTATGCTTGATTCTGGCAACTTTGTGCTTTATGATAAGAATTTTAGTATGTTATGGAGTAGTTTCCATAACTCAATGCCAAGTGACACCATATTAGGTGGCCAGAATTTGACAAGTGGAGCGAAGCTGGTCTCTAGTGTGTCACAATCAGACCATTCGAGTGGACATTTTTGGCTAAGAAGTCAGTTTGATTATGTACACCTAGCTGCTTGCCGTGTGAACAGCACATGTGAACCGGAGGATGCTTATTGGGCTAAAAACACATACTTTGAAGGTTATGGTTATCTACAGCTCAGTCTTAGCATTGAAGGTTCGCTTTGCCTACAAGATTATTCCTCTGGTTCTGAACTAGAGTGTTTAGCTAGTAGCAAGAACCTCACAGACAAGTCAAAGAATGCAACTTTTATCTACCGTGCTACACTTGATGAAGATGGGAACTTCAGATTGTATGCTCACCAATTCAAGGGAAATACTAGCTCAGGTGTGCAAACGCTGTGGAAAGCCGTGGAGGGGGATAAATGTCAAGTCCCGCTTTGTGGCTTGAACAGTTACTGCTTCATCAAGAGCGACAAAGCCATGTGTCAGTGTTATCCTGGTTTCATCCGTATCAAGAGTGGTGGTAACGATACCAGGTTTCTCGACTGCGAACAGAACCACAGCAAAGATAATTGTGAGAGCATAGAGGACCCAACAACGATGTACAATATGACTTCCTTGAAGGATATCTACTGGGGTGGTTCTCCTTATTTGGTTGTGCCAATGGAGATGGAAACTTGCAAGAAGTCTTGTCAGAAAGACTGTGATTGCAGGGCAGTGTTATATAAGAGCAGCATCTGCGAAAAATATAAGCTTCCACTTCTATATGGAAGAAGCTCTAAAGATGCATCAACGACGGCCTTCTTGAAGATGCCTTCAGGAATTGTCCTAAGTCCTACTTCAAACGAAACTGCTCTATCTTCAACAAAGCCCTCCCTCTTTGTTGATGACAAGAGAAGTCTTATAATGATTCTGTCCTTTACTCTGGGTTGGATTTCGTTTTTTGGTTTGGTCTTTGTATTGTATATTTTCATCATTTACAGGCGTCAAGTTCATAGGTATGCAATATTGTCTGCAAGTGAAAATCTGGGATTTGTAGAAGAATGTTCCTTGCGTTCATTTTCCTTTGATGAACTTGTGAAATCAACTGGAGGCTTTGCAGAGGAGATAGGCAGAGGATCTTTTGGAGCGGTTTATAGAGGCACAATAGGTGACAGTAACAGAATGGTTGCTGTGAGGAGACTTGAGAAATTTGTTGATGAAGGGGAGAGGGAATTCCAAGCAGAAATCACTGCCATTGCTCGAACTCATCATAAAAATCTGGTGAAGCTCATTGGTTTCTGCATTGATGGATCTAGGAAGCTTCTTGTTTTTGAATATCTCAGCAATGGGTCTCTTGCAGATCTTCTCTTCAAGTCTCATATGACTATGGCTTGGAAAGAGAGATTAAAGattgcattagacgtggctagaggagtcttatatctgcatgaggagtgtgatgttcggattatccactgcaacataaagcctcagaatatactcatggatgaaatgtggactgcaaagatatccgattttggatttgcaaggctgttgaaacccagctattcaagaatgaagaaaatggatgacaagagaagtaggtacttggcacctgaatggcagaaggatgaatcagtgtcagttaaagctgatgtttatagttttggggtggtgttactggagatTGCATGCCGTAGAAGCAGTAttgat 2181 0.3668 MASTPALLLLVLLMLFANETTAETNHTHLISIGSVISPTGTHASWASRSGLFAFGFYPHGNSYAVGIWLLNQPNHTIVWTHNRDSPSVPSNSTLRLTKEGGLLLLQGNEDPEFLTPLYYLYQAKVEVASASMLDSGNFVLYDKNFSMLWSSFHNSMPSDTILGGQNLTSGAKLVSSVSQSDHSSGHFWLRSQFDYVHLAACRVNSTCEPEDAYWAKNTYFEGYGYLQLSLSIEGSLCLQDYSSGSELECLASSKNLTDKSKNATFIYRATLDEDGNFRLYAHQFKGNTSSGVQTLWKAVEGDKCQVPLCGLNSYCFIKSDKAMCQCYPGFIRIKSGGNDTRFLDCEQNHSKDNCESIEDPTTMYNMTSLKDIYWGGSPYLVVPMEMETCKKSCQKDCDCRAVLYKSSICEKYKLPLLYGRSSKDASTTAFLKMPSGIVLSPTSNETALSSTKPSLFVDDKRSLIMILSFTLGWISFFGLVFVLYIFIIYRRQVHRYAILSASENLGFVEECSLRSFSFDELVKSTGGFAEEIGRGSFGAVYRGTIGDSNRMVAVRRLEKFVDEGEREFQAEITAIARTHHKNLVKLIGFCIDGSRKLLVFEYLSNGSLADLLFKSHMTMAWKERLKIALDVARGVLYLHEECDVRIIHCNIKPQNILMDEMWTAKISDFGFARLLKPSYSRMKKMDDKRSRYLAPEWQKDESVSVKADVYSFGVVLLEIACRRSSID 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g03007 727 ProSiteProfiles Protein kinase domain profile. 526 727 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g03007 727 Gene3D Phosphorylase Kinase; domain 1 492 602 - -
Adu01g03007 727 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 216 IPR036426 -
Adu01g03007 727 PIRSF SRK 1 726 IPR024171 GO:0004674
Adu01g03007 727 PANTHER S-RECEPTOR KINASE-LIKE PROTEIN 1 727 - -
Adu01g03007 727 SUPERFAMILY Protein kinase-like (PK-like) 510 724 IPR011009 -
Adu01g03007 727 Gene3D - 158 299 IPR036426 -
Adu01g03007 727 Gene3D - 37 154 IPR036426 -
Adu01g03007 727 Gene3D Transferase(Phosphotransferase) domain 1 603 727 - -
Adu01g03007 727 Pfam D-mannose binding lectin 76 168 IPR001480 -
Adu01g03007 727 SMART blect_4 36 155 IPR001480 -
Adu01g03007 727 ProSiteProfiles Bulb-type lectin domain profile. 27 153 IPR001480 -
Adu01g03007 727 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 727 - -
Adu01g03007 727 Pfam Protein tyrosine and serine/threonine kinase 529 721 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g03007 Adu-Chr1 100946014 100948215 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g03007 516 727 Trihelix Transcription Factor Family AT1G68690 43.458 4.85e-52 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Adu01g03007 PK_Tyr_Ser-Thr 1.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g03007 - - aip:107630435 1340.87