LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu01g02994	ATGGAAGGAAGGCAGAACCTTGATGCTACAAGAAAGTGCTTGCTAGCTAGCTTGGAAACATCAAGTGCTATTGGTTCTGCATTAGATGAATCTGAATCAAGATTGGAGCTTCTTCGCCAGCGATGTCAATCCCTGCAAACTTCATTCAGACCAATCTCCATGCAGAAATGCTCGTTCATGGACGTTGGCTATGGTATAGATAGTGTTCTATGTTCTGCTGCTGCTGTCCTCAAGGTGTTTGAATTTGTGCAGCATTTGGAGAATTCTCCATTGACTGACCCTGGTTCCGATCTATGCTCTTACGTCTCAGATGCCAAGAAGCTTGAAGAAGCCTTGAAGCTTTTCACTGATAATTGCACGTTAGCAATTGGCTGGTTGCAGGGTGTTCTTGACTTCTTACAAGACAAAGCGATCACCAATGAGTTTTACCTCTTTCAGGTGAAGAAATCTTTGAGGATACTGCGAGAATTGCAAGCCGTGGAAGAGGGAGTTCGCATCAATGGAGGTTTTCCCAGTGCAGCCTTAGACAATCTAGAGACTGAGTTCCAAAGACTTCTGATGGCAAACTCAATGCCCATTCCTTTGGTTTCGTTAGGATCACACGTCGCAACACAAGCTTTGCCAGGTTCTGTTATGGGGAAGTTGCAGGCCATCATTGAGCGGTTAAATGCAAACAGCAGGCTAGCCAAGTCTAAATTTGAGGATGTCAGGGAAATAGCGAGTTACATAGACCAATGGGGCATTGATTTGGAGTTGGTTGTCAAGAACGTTCTTGATACTGAGTACATGCTATCTTGCCGTGTCTTTGAGAAGATTGGCCGAGAGGCATCAACTGAATGTTTTGCCAGGATCGCCATCAGATCAGGAATTCTTTCTTTCATTCTATTTGGAAGGAATGTTTCAGAGAGTAGAAATGATCCCTACAAGTTGTTGAACATGCTAGACATATTCATGAAGCTGCAAAGGCCAAGTTTTCCTCCTCGAGATGGCGGTGTCCCTAGGCTGGTAAGCTTTGTAACTGATTACTGCAAGCAGCTGCTTAATGATACATATCTACCACATTTGAAAAAGGTTCTAAAAATTCATCTTAGTTGGAGAAATGAAACATATGAAGAGGGTATTATTTTCACACAAATATATGACACAATCAAGGAAGTTGCAGTTAATCTTGATTCTTGGTCAAAGGCCTATGAGGATATCACATTGTCCTACATTTTCATGATAAATAATCATTGCCATTTCTACAATTTGAGGGGTACCATGCTTGGGGATATGATGGGAGATACTTGGTTAGGAGCACATGAACAATACAAGGACTATTATGCAGCACTTTATTTGAGGAATAGCTGGGGAAAGCTTCTATCAATTATTGTTCAAAAAGACTTACTTTCATCCTCATTGAGTAGCCAAGATTTGGGAAAGAGATTGCATGCTTTCAATGTAGCTTTTGATGAGAGGTACAAGAAGGAATCTAGTTGGACAATTTGTGATGAGGCCTTGAGGAAAAACATATGCAAGCATTTGGTGGAATGTATTGTACCAATCTATAAGGCCTATGTGAAGAATTACAACTTGTCAATCGAGAATGAAGGTATGGTTGTGAAGCATATCAAATATACAGCAGAGAGTTTGGAGTAA	1638	0.4121	MEGRQNLDATRKCLLASLETSSAIGSALDESESRLELLRQRCQSLQTSFRPISMQKCSFMDVGYGIDSVLCSAAAVLKVFEFVQHLENSPLTDPGSDLCSYVSDAKKLEEALKLFTDNCTLAIGWLQGVLDFLQDKAITNEFYLFQVKKSLRILRELQAVEEGVRINGGFPSAALDNLETEFQRLLMANSMPIPLVSLGSHVATQALPGSVMGKLQAIIERLNANSRLAKSKFEDVREIASYIDQWGIDLELVVKNVLDTEYMLSCRVFEKIGREASTECFARIAIRSGILSFILFGRNVSESRNDPYKLLNMLDIFMKLQRPSFPPRDGGVPRLVSFVTDYCKQLLNDTYLPHLKKVLKIHLSWRNETYEEGIIFTQIYDTIKEVAVNLDSWSKAYEDITLSYIFMINNHCHFYNLRGTMLGDMMGDTWLGAHEQYKDYYAALYLRNSWGKLLSIIVQKDLLSSSLSSQDLGKRLHAFNVAFDERYKKESSWTICDEALRKNICKHLVECIVPIYKAYVKNYNLSIENEGMVVKHIKYTAESLE	545

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu01g02994	545	Gene3D	Exocyst complex component Exo70	322	545	-	-
	Adu01g02994	545	Gene3D	Exocyst complex component Exo70	133	321	-	-
	Adu01g02994	545	PANTHER	EXOCYST SUBUNIT EXO70 FAMILY PROTEIN	234	319	-	-
	Adu01g02994	545	PANTHER	EXOCYST SUBUNIT EXO70 FAMILY PROTEIN	319	545	-	-
	Adu01g02994	545	PANTHER	EXOCYST SUBUNIT EXO70 FAMILY PROTEIN	4	232	-	-
	Adu01g02994	545	SUPERFAMILY	Cullin repeat-like	76	545	IPR016159	-
	Adu01g02994	545	PANTHER	EXOCYST COMPLEX PROTEIN EXO70	319	545	IPR004140	GO:0000145\|GO:0006887
	Adu01g02994	545	PANTHER	EXOCYST COMPLEX PROTEIN EXO70	234	319	IPR004140	GO:0000145\|GO:0006887
	Adu01g02994	545	Coils	Coil	28	48	-	-
	Adu01g02994	545	PANTHER	EXOCYST COMPLEX PROTEIN EXO70	4	232	IPR004140	GO:0000145\|GO:0006887
	Adu01g02994	545	Pfam	Exo70 exocyst complex subunit	246	321	IPR046364	GO:0000145\|GO:0005546\|GO:0006887
	Adu01g02994	545	Pfam	Exo70 exocyst complex subunit	326	545	IPR046364	GO:0000145\|GO:0005546\|GO:0006887

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu01g02994	Adu-Chr1	100777325	100779290	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu01g02994	3	545	EXO70 exocyst subunit family	AT4G31540	40.659	2.52e-159	468

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu01g02994	K07195		-	adu:107471547	1055.43