Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02978 ATGGCATCTGATCTGAGTTCAGGGCTGTCCAAGAAAACGTTTGTTTTTGGTTTGAAGGCATGGGAATTAATGGGGATACTAGTTGGGTTGTTCATTGTAATCATTCTCGTAGTGCTATCAATATGTCTCACATCAAGAAAGAAATCCAGAAGAGTCAATGGAATGATTCCCCTTAGTCGCATGTTATCTGTTTCGGATGAGATCAAAGAGATTAGAGTTGATCAAGCTTCGGCAAATAATCAACCTCAAAGTGGTGCTTTTATGAGTCTGTATGACAAATTTAGTGACAGGGACTCTGAAAAGGTATTGATCCAAACAAAGAATGGGGATAATAGCAGTCACTCAGGTTCATTTATCCATGCCGAGAAAGACACAGGTGGTTCCCAATCAGGAGAAGAAAGTGGAGCCAAGTCTGTTTCTGCTTATAGAATTTCTTCAGCTTCACCTTTATCTGGTCTGCCCGAGTTCTCTCACCTCGGCTGGGGGCACTGGTTTACATTAAGGGACCTAGAAGTTGCAACGAACAGGTTTTCGAAAGACAATGTTATCGGTGAAGGGGGATATGGAGTTGTTTATCAAGGCAAGTTAATCAATGGGAGTCCTGTGGCTGTTAAGAAGCTCCTCAATAATCTAGGACAAGCCGAGAAGGAATTTAGGGTGGAAGTTGAGGCTATTGGTCATGTGCGGCACAAGAACTTAGTCAGACTTCTAGGTTATTGCATTGAAGGCACTCACAGGTTGTTAGTTTATGAGTATGTTAACAACGGCAATTTAGAGCAATGGCTCCATGGAGCCATGCGGCAGTATGGTTTTCTCACTTGGGATGCTCGGATTAAAATTCTTCTTGGAACAGCTAAAGCGTtggcttacttgcacgaggcaatcgaaccaaaagtagtacatcgagatattaagtcgagcaatattttaattgatgatgatttcaatgccaaaatatccgactttgggctggcTAAGTTACTTGGTGCTGGAAAAAGTCATATTACAACTCGAGTAATGGGAACTTTCGGATATGTAGCTCCTGAATATGCCAATTCTGGCTTATTGAATGAGAAGAGTGATGTTTATAGCTTCGGGGTATTGCTCCTCGAAGCAATAACCGGAAGAGACCCAGTGGATTATAGCCGACCAGCAGCTGAGGTAAATCTTGTTGACTGGCTCAAGATGATGGTAGGCAACAGGCGAGCAGAGGAGGTGGTGGATCCCAACATTGAGACCAGGCCATCGACAAGTGCCCTGAAAAGGGTCCTTTTGACTGCGTTGAGGTGTGTTGATCCAGATTCTGAGAAAAGACCGAAAATGAGTCAAGTTGTCCGAATGCTTGAATCAGAGGAATATCCTGTACCTAGAGAGGACCGAAGACGCCGAAAAAATCAGGCCGGAAACGCGGAGCTGGATGGTCAGAAGGAGACTTCTGATACAGATAAGAGCGACAATCCAGATTCCAAGCCAAATGGCAGAAGTAACCAACGGAAGTAA 1500 0.408 MASDLSSGLSKKTFVFGLKAWELMGILVGLFIVIILVVLSICLTSRKKSRRVNGMIPLSRMLSVSDEIKEIRVDQASANNQPQSGAFMSLYDKFSDRDSEKVLIQTKNGDNSSHSGSFIHAEKDTGGSQSGEESGAKSVSAYRISSASPLSGLPEFSHLGWGHWFTLRDLEVATNRFSKDNVIGEGGYGVVYQGKLINGSPVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRLLVYEYVNNGNLEQWLHGAMRQYGFLTWDARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVLLLEAITGRDPVDYSRPAAEVNLVDWLKMMVGNRRAEEVVDPNIETRPSTSALKRVLLTALRCVDPDSEKRPKMSQVVRMLESEEYPVPREDRRRRKNQAGNAELDGQKETSDTDKSDNPDSKPNGRSNQRK 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02978 499 ProSitePatterns Protein kinases ATP-binding region signature. 183 206 IPR017441 GO:0005524
Adu01g02978 499 PANTHER OS01G0323000 PROTEIN 2 499 - -
Adu01g02978 499 ProSiteProfiles Protein kinase domain profile. 177 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g02978 499 CDD STKc_IRAK 183 449 - -
Adu01g02978 499 Pfam Protein kinase domain 178 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g02978 499 SMART serkin_6 177 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g02978 499 Gene3D Phosphorylase Kinase; domain 1 157 252 - -
Adu01g02978 499 MobiDBLite consensus disorder prediction 106 134 - -
Adu01g02978 499 Gene3D Transferase(Phosphotransferase) domain 1 253 466 - -
Adu01g02978 499 SUPERFAMILY Protein kinase-like (PK-like) 161 454 IPR011009 -
Adu01g02978 499 ProSitePatterns Serine/Threonine protein kinases active-site signature. 299 311 IPR008271 GO:0004672|GO:0006468
Adu01g02978 499 MobiDBLite consensus disorder prediction 436 499 - -
Adu01g02978 499 PANTHER RECEPTOR-LIKE KINASE PLANT 2 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02978 Adu-Chr1 100505938 100509948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02978 17 451 Trihelix Transcription Factor Family AT1G70460 41.364 2.99e-96 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Adu01g02978 Pkinase 6.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02978 - - gmx:100793499 888.641