Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02966 ATGGTAGTTGAGGAAAGTATAGATGGAGATATTACTTCATGTGAGGTGACAGGATCAGTAAGTCATTCACAGATTCCAAATCACGAAAATTCGCAAGAAATTAAGGGAAGGGAGGAGGCTCCAAAGAAGAACAAGGCCAAAACTGAAAGCAATAAAACAGTACCCTTTTACAAGCTTTTCTCATTTGCAGATTCTTGGGATCATTTGCTTATGTTTGTTGGGACAATAAGTGCAGTTGGGAATGGAATATCCAACCCTTTAATGAGTGTACTAATTGGAGATACAATTGATGCTTTTGGAAGAAATGGTAGCAATAAACAAGTTGTTCATGAAGTTTCCAAGGTCTCTCTGAAGTTTCTATGCTTGGGTATAGCTGCGTTGTTTGCAGCATTTTTGCAGGTTTCTTGTTGGGTGATCACTGGGGAGAGACAAGCTGCAAGAATAAGAGGCTTATACCTCAAAGCAATTCTGAGACAAGATGTCGGCTTCTTCGACAAGGAAACTAACACCGGCGAGGTTACTGAAAGGATGTCAGGAGACACATTTCTTGTTCAAGAAGCCATGGGGGAAAAGGTAGGACAGTTCATACAATATGTGGCAAGCTTTTTAGGAGGGCTTATCATAGCATTCATCAAGGGTTGGCTTCTAACCCTTGTCCTGCTATCTTCCCTGCCTCCTCTTGTCTTAGCTGGTTCTCTAATGACTTGCGCTTTCGCGAAGATGGCATCTCGTGGACAAGCAGCATATTCTGAAGCAGCAACTATATTTGACAGGACTATTGGTTCAATTAGAACTGTTGCATCCTTTACTGGTGAGGATCAAGCTATAGCTTTATACAATGAATCCTTAACCAAAGCATATAGGAGTGGTGTGCAAGAAGGAGTGGCTGCTGGTTTAGGCCTTGGTTTGCTTCGATTGCTCGCTTTCAGCAGTTATGCTTTGGGTGTATGGTATGGAGGGAAGATGGTTCTAGAGAAAGGATATACAGGAGGTGAAGTCATGAGTGTGTTTTTTGCAGTATTGATTGGATCATTGTCTCTGGGGCATGCATCTCCAAGCTTAACTGCAATTGCTGCAGGACAAGCAGCAGCCTATAAAATGTTTGAAACAATAAAGAGACAGCCGGATATTGATTCTTATGACACGGCTGGTCGGAAGCTAGATGATATTTCCGGAGATATAGAACTTAGAGAGGTTTGCTTTAGTTATCCTACAAGACCAGATGAACTCATATTCAATGGATTTTCCATTTCAATATCAAGTGGCACTACTGCAGCTTTGGTAGGACAAAGTGGGAGTGGGAAATCAACAGTTGTTAGTTTGATAGAGAGATTTTATGATCCACAGGCTGGTGAAGTTCTCATTGATGGTATCAACCTCAGAGAATTTCAACTGAAATGGCTCAGACAGAAGATAGGCCTAGTTAGCCAGGAGCCGGTTCTGTTTTTGTGTAGCATTAAAGAGAATATTGCATATGGTAAGGATGGTGCAACAGATGAAGAAATCATAGCTGCAGCAGAACTTGCTAATGCTGCTAGATTCATAGATAAATTTCCTCATGGACTCGACACGATGGTTGGTGAGCATGGAACTCAGCTTTCTGGGGGACAAAAGCAAAGGATTGCTATAGCAAGAGCAATTCTGAAAGATCCTAGAATCTTATTACTTGATGAAGCTACAAGTGCCCTTGATGCTGAATCTGAGAGAGTGGTTCAAGAGACACTAGATAGAATAATGGTTAACAGAACAACTGTTATTGTAGCGCATCGCTTAATCACAATAAGAAATGCTGACACGATTGCTGTTATTCATCAAGGAAAAGTTGTAGAAAAAGGTTCACATGATGAGCTCATTAAGGATCCTAATGGAGCTTTTAGCCAGCTTATTAGACTCCAAGAAATAAAAAAGGAGACAGAACAGAATGATGAATGCTCTGCAGATTCTGGACGGCAATCAAGCCGAGGATCATCCGAAATTGGAAACAGCAATCATCACTCATTCAGAATAACAGATGCTATGACATCAGAAGGAGGACCTGAAGTTCTTCCTTCAGCAGCATTATCACCAACACCTCCAGAAGTTCCATTTTTCAGGCTTGCTTGTCTTAACAAGCCTGAAATCCCAGTTTTACTCTTAGGGACATTGGTAGCAGTTATATGTGGAACTATTACACCTGCTCTGGGGCTTGTAGTCTCTAAAATGATAAACACTTTCTTTGAACCTGCGGATAAACTCCGCAAAGATTCAAAGCATTGGGCATTAGTATTTGTTGCTTTTAGTGTGGCTGCATTCATATTTCATCCATTGAGGTCCTACTTCTTTTCTGTGGCTGGTTCTAAGTTGATAAAAAGGATTCGGCTTATGTGTTTTGATAAAATAATTCACATGGAAGTAGGATGGTTTGACAAAGCTGAGAATTCAAGTGGAGCCCTTGGAGCAAGGTTGTCAATTGATGCTGCTTCGCTTCGCGCTTTGTTTGGAGATGCACTTGGTATGTTGGTTCAAGATGCTTCCACTGCAGTTACAGCCTTGGTGATTGCATTCGAGGCGAATTGGCAGCTAGCTCTCATTATCCTTGCTATGATGCCTCTTCTGTTGTTAAATGGACATTTACAAATCAGATCCATGAGAGGATTTAGTGCAAATGCAAAGAAACAATATGAGGAAGCAAGTCAAGTAGCAAATGATGCAGTAGGGAATATCAGAACAGTTGCTTCTTTCTGTGCTGAAGAGAAGGTAATGGAGTTATATCAGAAGAAATGTGAAGGACCAATGCAAACAGGCATAAGGCAAGGTTTAGTGAGTGGAAGTGGTTATGGCCTATCAATCTTCTTTCTGTTCTGTGTCTATGGATGCAGTTTCTACGCCGGTGCCAGGCTTGTTAAGGATGGCAAAACAACAATGTCAGAAGTTTTCCGAGTATTTTTTTGTCTCACAATGACTGCTATAGCATTATCTCAGTCTGGCCTACTCGCCCCGGGCGCAAGCAAAGCAAAAAGTTCAGCTGCTTCTGTGTTTGCCATTCTTGATCAGAAATCAAAAGTAGACTCCAGTGATAAGTCTGGAATCACATTGCAAGATGTGAAGGGAGAGATTAAATTCAACCATGTCACTTTCAAGTATCCAACTAGGCCTAATGTTCATATATTCACAGATCTTTCCTTAACCATTCATCCAGGACAGACAGTGGCTCTAGTTGGAGAAAGTGGGAGTGGAAAGTCAACAGTAATATCATTGCTGCAAAGATTTTATGAACCAGATTCAGGTGAGATAACTCTAGATGGAACAGAAATCAAGAAGCTACAACTGAAATGGTTTAGGGAGCAAATGGGGCTAGTAAGCCAGGAGCCTGTGTTGTTCAATGACACCATTAGAGCCAACATTGCATATGGAAAGGGAGGGAATGCAACAGAAGCAGAAATTGTTGCTGCTGCACAACTTGCTAATGCTCACAAATTCATTAGCAGTTTGCACAAGGGTTATGAGACAATAGTAGGAGAGAGAGGGATTCAAGTATCAGGGGGTCAGAAGCAGAGGGTGGCAATAGCAAGAGCCATAGTGAAGAGTCCAAAGATATTGCTTCTAGATGAAGCAACAAGTGCACTAGATGCTGAGTCAGAAAAGGTGGTTCAGGATGCACTTGACAGGGTTATGGTAAACAGAACCACCATTGTGGTGGCACATAGGTTATCAACCATTAAGGGTGCACATTTAATTGCTGTGGTTAAAAATGGTGTCATTGCTGAGAAAGGCACACATGATGCTTTGCTCAAAAAGGGTGGCACCTATGCTTCCTTAGTAGCATTCTTCTCAAGTTCTAGTTCATCTTAA 3831 0.4153 MVVEESIDGDITSCEVTGSVSHSQIPNHENSQEIKGREEAPKKNKAKTESNKTVPFYKLFSFADSWDHLLMFVGTISAVGNGISNPLMSVLIGDTIDAFGRNGSNKQVVHEVSKVSLKFLCLGIAALFAAFLQVSCWVITGERQAARIRGLYLKAILRQDVGFFDKETNTGEVTERMSGDTFLVQEAMGEKVGQFIQYVASFLGGLIIAFIKGWLLTLVLLSSLPPLVLAGSLMTCAFAKMASRGQAAYSEAATIFDRTIGSIRTVASFTGEDQAIALYNESLTKAYRSGVQEGVAAGLGLGLLRLLAFSSYALGVWYGGKMVLEKGYTGGEVMSVFFAVLIGSLSLGHASPSLTAIAAGQAAAYKMFETIKRQPDIDSYDTAGRKLDDISGDIELREVCFSYPTRPDELIFNGFSISISSGTTAALVGQSGSGKSTVVSLIERFYDPQAGEVLIDGINLREFQLKWLRQKIGLVSQEPVLFLCSIKENIAYGKDGATDEEIIAAAELANAARFIDKFPHGLDTMVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESERVVQETLDRIMVNRTTVIVAHRLITIRNADTIAVIHQGKVVEKGSHDELIKDPNGAFSQLIRLQEIKKETEQNDECSADSGRQSSRGSSEIGNSNHHSFRITDAMTSEGGPEVLPSAALSPTPPEVPFFRLACLNKPEIPVLLLGTLVAVICGTITPALGLVVSKMINTFFEPADKLRKDSKHWALVFVAFSVAAFIFHPLRSYFFSVAGSKLIKRIRLMCFDKIIHMEVGWFDKAENSSGALGARLSIDAASLRALFGDALGMLVQDASTAVTALVIAFEANWQLALIILAMMPLLLLNGHLQIRSMRGFSANAKKQYEEASQVANDAVGNIRTVASFCAEEKVMELYQKKCEGPMQTGIRQGLVSGSGYGLSIFFLFCVYGCSFYAGARLVKDGKTTMSEVFRVFFCLTMTAIALSQSGLLAPGASKAKSSAASVFAILDQKSKVDSSDKSGITLQDVKGEIKFNHVTFKYPTRPNVHIFTDLSLTIHPGQTVALVGESGSGKSTVISLLQRFYEPDSGEITLDGTEIKKLQLKWFREQMGLVSQEPVLFNDTIRANIAYGKGGNATEAEIVAAAQLANAHKFISSLHKGYETIVGERGIQVSGGQKQRVAIARAIVKSPKILLLDEATSALDAESEKVVQDALDRVMVNRTTIVVAHRLSTIKGAHLIAVVKNGVIAEKGTHDALLKKGGTYASLVAFFSSSSSS 1276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02966 1276 Gene3D - 1022 1273 IPR027417 -
Adu01g02966 1276 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1021 1268 IPR027417 -
Adu01g02966 1276 ProSitePatterns ABC transporters family signature. 1172 1186 IPR017871 GO:0005524
Adu01g02966 1276 Gene3D ABC transporter type 1, transmembrane domain 58 1002 IPR036640 GO:0005524|GO:0016021
Adu01g02966 1276 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 43 1270 - -
Adu01g02966 1276 MobiDBLite consensus disorder prediction 31 47 - -
Adu01g02966 1276 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 394 630 IPR003439 GO:0005524
Adu01g02966 1276 ProSitePatterns ABC transporters family signature. 533 547 IPR017871 GO:0005524
Adu01g02966 1276 Pfam ABC transporter transmembrane region 710 982 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu01g02966 1276 Pfam ABC transporter transmembrane region 71 345 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu01g02966 1276 MobiDBLite consensus disorder prediction 17 47 - -
Adu01g02966 1276 CDD ABC_6TM_Pgp_ABCB1_D1_like 71 355 - -
Adu01g02966 1276 SMART AAA_5 421 607 IPR003593 -
Adu01g02966 1276 SMART AAA_5 1059 1252 IPR003593 -
Adu01g02966 1276 MobiDBLite consensus disorder prediction 645 665 - -
Adu01g02966 1276 CDD ABC_MTABC3_MDL1_MDL2 1032 1267 - -
Adu01g02966 1276 Gene3D - 384 633 IPR027417 -
Adu01g02966 1276 PANTHER - 43 1270 - -
Adu01g02966 1276 SUPERFAMILY ABC transporter transmembrane region 52 378 IPR036640 GO:0005524|GO:0016021
Adu01g02966 1276 CDD ABC_6TM_Pgp_ABCB1_D2_like 702 1015 - -
Adu01g02966 1276 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1032 1269 IPR003439 GO:0005524
Adu01g02966 1276 CDD ABC_MTABC3_MDL1_MDL2 394 632 - -
Adu01g02966 1276 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 711 997 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu01g02966 1276 Pfam ABC transporter 413 561 IPR003439 GO:0005524
Adu01g02966 1276 Pfam ABC transporter 1051 1200 IPR003439 GO:0005524
Adu01g02966 1276 SUPERFAMILY ABC transporter transmembrane region 698 1012 IPR036640 GO:0005524|GO:0016021
Adu01g02966 1276 MobiDBLite consensus disorder prediction 637 665 - -
Adu01g02966 1276 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 387 632 IPR027417 -
Adu01g02966 1276 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 72 359 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02966 Adu-Chr1 100232336 100238266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02966 39 1267 Calmodulin-binding Proteins AT2G36910 44.320 0.0 1045
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02966 K05658 - gmx:100777713 1845.09