Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02954 ATGGAAGAAATGGTGATGGCAACATTGGACCTAATAACTGCATCTCCTCATTCATCTTCATCTTCTTCATCTTCACCCACCACTGATAATAATAACAACCACCCTTCTTCTTCTTCTTCTTCTTCTTCTTCATCACTTTGTCTCTCAAGCATCTCAACAAGAAGAACCGATTTGAGCACCGACCTCAGACTTGGCCTTAGTCTCTCTCCTTCTCATTATTCAACACCATCAAGGGAACAAAGAAGTAGTTTTGATTGGCCACCAGTGAAGTCAACATTGAGGTGCACCCTTGTTGAGAAAAGTCAAATATCTCAGTTTGTTAAAGTATACATGGAAGGCATCCCCATCGGTAGGAAGCTCAATCTGCTGGCACACCATAATTATCATGCTCTTGTTAAGGCTCTTGCCAACATGTTCAGAACTACCATACTCTGCCCTGACTCTCATCAATTACCACTCATCTCTGGGAATAATGTTCATGTTCTTACTTATGAGGATCAAGAAGGGGATTGGATGATGGTTGGAGATGTTCCATGGGAGATGTTCTTGACAAGTGTGAAGAAGTTGAAGATCACAAGAGCTGACAGATGTTAA 594 0.4158 MEEMVMATLDLITASPHSSSSSSSSPTTDNNNNHPSSSSSSSSSSLCLSSISTRRTDLSTDLRLGLSLSPSHYSTPSREQRSSFDWPPVKSTLRCTLVEKSQISQFVKVYMEGIPIGRKLNLLAHHNYHALVKALANMFRTTILCPDSHQLPLISGNNVHVLTYEDQEGDWMMVGDVPWEMFLTSVKKLKITRADRC 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02954 197 MobiDBLite consensus disorder prediction 1 46 - -
Adu01g02954 197 ProSiteProfiles PB1 domain profile. 104 196 IPR000270 GO:0005515
Adu01g02954 197 Gene3D - 99 197 - -
Adu01g02954 197 SUPERFAMILY CAD & PB1 domains 104 191 - -
Adu01g02954 197 Pfam AUX/IAA family 80 193 IPR033389 -
Adu01g02954 197 MobiDBLite consensus disorder prediction 12 46 - -
Adu01g02954 197 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 34 197 IPR003311 GO:0005634|GO:0006355
Adu01g02954 197 PANTHER AUXIN-RESPONSIVE PROTEIN IAA31 34 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02954 Adu-Chr1 100052312 100054487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02954 88 191 B3 DNA Binding Superfamily AT1G59750 35.238 1.28e-10 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Adu01g02954 AUX_IAA 3.4e-31 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02954 K14484 - gmx:100527448 196.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g02954 01 100052312 100054487 Adu01g02954 01 100052312 100054487 ECH