Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02925 ATGGAACTTTCGAGTCAAGAAGGAGATATACCAATCGCAGTAAACACCACCGCCAATTATGGTGGCAATGGCCATGGCGCCCACATCAACATTCACCACACCCAAAACCCTTCCAATGGCTCCTCTATGCACCCGCTCGACAATGGACCCTACAATAGCAAGCAGGAGGAGGAAGAGGAGGAGGAGGTGGTGGTGCCGCTCGTCAGGTACAGAGAGTGCCTCAAGAACCATGCCGCCGCCATGGGAGGAAATGCCACCGACGGTTGTGGCGAGTTCATGCCAAGCGGAGACCACGGAACCATGGAAGCCCTCACCTGCTCCGCCTGCCGCTGCCACAGAAACTTCCACCGAAAGGAAATCCAAGGGGAGCCCTCAGCCCCACCCCCGCCCTTGCTGGAGTACCACCACCACCACTTCAACACCGCCACCAGGCACCTCGCCGCTTCTAGAAAGTTCCTTCACAAGAACATGCACCATCATCATCATCTCGGTTACCCTACTGCCGGCGGCGGTAACATCCTTCTCCGCTTACTATCACCACCCGTCCGCAGCACCTCACATGCTACTTGCCCTCTCCGGCGCTGGCATCGCGGCGCCGCCGGAGAGCACCGCGGCACCAATTTCCGCCGCCGCAGCTTTAGCGTCTCCGAGGAAGAGGTTCAGGACGAAGTTCAGCCAGGAGCAGAAGGAGAAGATGCTGGCTTTTGCGGAGAAGGTTGGTTGGAAGATTCAGAAGCAAGAAGACTCGGTTGTTCAGAACTTCTGCAACGAGATTGGAGTCAAACGCAGAGTCCTCAAGGTGATGAAGACATACATGGAGTTAATATTATTAGAGCCTGA 840 0.5619 MELSSQEGDIPIAVNTTANYGGNGHGAHINIHHTQNPSNGSSMHPLDNGPYNSKQEEEEEEEVVVPLVRYRECLKNHAAAMGGNATDGCGEFMPSGDHGTMEALTCSACRCHRNFHRKEIQGEPSAPPPPLLEYHHHHFNTATRHLAASRKFLHKNMHHHHHLGYPTAGGGNILLRLLSPPVRSTSHATCPLRRWHRGAAGEHRGTNFRRRSFSVSEEEVQDEVQPGAEGEDAGFCGEGWLEDSEARRLGCSELLQRDWSQTQSPQGDEDIHGVNIIRA 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02925 279 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 70 119 IPR006456 -
Adu01g02925 279 Pfam ZF-HD protein dimerisation region 68 120 IPR006456 -
Adu01g02925 279 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 69 120 IPR006456 -
Adu01g02925 279 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 6 154 - -
Adu01g02925 279 MobiDBLite consensus disorder prediction 24 60 - -
Adu01g02925 279 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 4 6 154 - -
Adu01g02925 279 MobiDBLite consensus disorder prediction 24 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02925 Adu-Chr1 99701735 99702866 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02925 1 137 ZF-HD Transcription Factor Family AT1G14440 45.912 1.87e-32 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Adu01g02925 ZF-HD_dimer 6e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02925 - - adu:107465625 514.227