Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02908 ATGAGAGGTAACCCTGGTGAAAGGTTGAAACTTGATCTCTCCTTAATTCAGATGAACAATGATAGAAATTGCAATAATGATAGCAATAGTAGTGATAATAATAATAGTTGTAACAATAATTTTGTTAGTGGACTCTTGAAGAGGAATAGAATTGCATTTTTTGATAAGGAGTGTTCAAAGGTTGCTGAACATGTTTACCTTGGTGGTGATGCTGTTGCTAAGAATAAGGATATATTGAAACAGAATAGGATCACTCAGATCTTGAACTGTGTTGGTTTTGTGCGCCTCGAGTATTTTAAGGCTGATTTTGTGTATAGAACATTATGGCTTCAGGATAGTCCTTCAGAGGATATTACTAGTATCTTGTATGATGTGTTTGATTACTTTGAGGATGTTAGGAAACAAGGTGGTAGGGTGTTTGTGCACTGTTGGCAAGGTGTGTCTAGGTCTACTTCGTTGGTGATTGCATACCTCATGTGGAGGGAAGGACAAAGCTTTGATGATGCTTTTCAGTTGGTGAATGCTGCAAGGGGTATTGCCGATCCGAATATGGGGTTTGCTTGCCAGTTGTTGCAGTGCCAAAAGATGGAAAGGGATGCCAGAGGTGCTGTTGGTCAGATTATTCGCTACGAGAAAGCGGAAGGACCCATTAAAGTGATTAGGGAAGCTCATGAACCTGCTGACTTTTGGAAAGTTTTCTCAAGGTTCTTGCCTTTGATGGATAGATCTTACAGTAAAGTAGAAAGTTTCAAATCAAGTGCTAAGGTTCGGTCTGATGAGAGGAAAGTGGGTTCCTATGACGTTGATTATGAAATTTTCCAAAAAGCTATTATTGGAGGTTTTGTGCCACCATTTCCATCATCAGAGGATGAACATGAAACCCATCTTCCTGCAAGAGAGAGTAGTTGGAGTGCCTTAAGGCGTAAAGTTTTCTCTTCTCATATGAAGGAGATTGTCACCAGTCCCTAA 969 0.3994 MRGNPGERLKLDLSLIQMNNDRNCNNDSNSSDNNNSCNNNFVSGLLKRNRIAFFDKECSKVAEHVYLGGDAVAKNKDILKQNRITQILNCVGFVRLEYFKADFVYRTLWLQDSPSEDITSILYDVFDYFEDVRKQGGRVFVHCWQGVSRSTSLVIAYLMWREGQSFDDAFQLVNAARGIADPNMGFACQLLQCQKMERDARGAVGQIIRYEKAEGPIKVIREAHEPADFWKVFSRFLPLMDRSYSKVESFKSSAKVRSDERKVGSYDVDYEIFQKAIIGGFVPPFPSSEDEHETHLPARESSWSALRRKVFSSHMKEIVTSP 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02908 322 ProSitePatterns Tyrosine specific protein phosphatases active site. 141 151 IPR016130 GO:0016311|GO:0016791
Adu01g02908 322 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 116 177 IPR000387 GO:0016311|GO:0016791
Adu01g02908 322 Gene3D Protein tyrosine phosphatase superfamily 57 213 IPR029021 -
Adu01g02908 322 SMART dsp_5 57 196 IPR020422 GO:0006470|GO:0008138
Adu01g02908 322 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 44 196 IPR029021 -
Adu01g02908 322 Pfam Dual specificity phosphatase, catalytic domain 65 195 IPR000340 GO:0008138|GO:0016311
Adu01g02908 322 ProSiteProfiles Dual specificity protein phosphatase domain profile. 57 199 IPR020422 GO:0006470|GO:0008138
Adu01g02908 322 CDD DSP 58 192 - -
Adu01g02908 322 PANTHER MKPA PROTEIN 196 321 - -
Adu01g02908 322 PANTHER MKPA PROTEIN 4 195 - -
Adu01g02908 322 PANTHER PROTEIN-TYROSINE-PHOSPHATASE MKP1 196 321 - -
Adu01g02908 322 PANTHER PROTEIN-TYROSINE-PHOSPHATASE MKP1 4 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02908 Adu-Chr1 99573510 99574478 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02908 56 195 Protein tyrosine phosphatase (PTP) family AT3G06110 36.429 1.42e-25 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02908 - - adu:110273875 616.69