Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02899 ATGGATCTTGTCAATGGAGGTAACAGTCTAGCTTCCAAGCAGCGGCTACGCTGGACCAATGATCTCCACGAACGCTTCGTCGACGCGGTTGCTCAACTTGGTGGGCCAGATCGTGCCACACCTAAAGGTGTCCTTAGAGTTATGGGTGTGCAAGGGTTGACAATCTACCATGTCAAAAGTCATTTACAGAAATATCGACTAGCAAAATACCTACCTGACTCCTCAACTGATGGGAAAAACGCTGAGAAGAAAGAAACAGAGGATGTACTTTCTAATCTTGATGGTTCATCTGGGATGCAAATTACTGAAGCACTAAAGCTTCAAATGGAGGTGCAGAAGCGATTGCATGAGCAATTAGAGGTGCAGAGACAACTACAACTAAGGATAGAAGCGCAGGGTAAATACTTGAAGAAGATTATTGAAGAGCAGCAGCGGCTCGGCGGTGTTCTTATAGAAGCACCTGACTGGGGGGCTACAGCTCTGGTCACAGGAGTTACGCGCCAAGAAGATAATAAGACCCACCAAGCAACCCCTGCCACAACCTCTGAGAGCCCCTTTCTGGAGGTAGCTGTGAAAGAACAAGCCCTGGCTAAGAGTCTTTCAATTGATGAATCATTTTCATCTCAGCATGAACCTTTGACACCTGATTCTGGTTGCCATGTTGGCAACCCCACTGGCGGCCCTGAAGAGGAGAGATCAACAAAGAAGCAGCGCTTGAACATTGATGGATCATATTCTAGACCAGAAATGCTGCTTCCGCATCAAATACTGGAGTCAAATGTCTCATCAAATAAGCAACCAAATGTTTTTTCTACTCCCCAGGAGGAATATGATCATTCAATGGGTATAGCTGCCAAAAGTGTGACAAGGAATTCTAGTAGGGTTGTATGA 891 0.459 MDLVNGGNSLASKQRLRWTNDLHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSSTDGKNAEKKETEDVLSNLDGSSGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQRLGGVLIEAPDWGATALVTGVTRQEDNKTHQATPATTSESPFLEVAVKEQALAKSLSIDESFSSQHEPLTPDSGCHVGNPTGGPEEERSTKKQRLNIDGSYSRPEMLLPHQILESNVSSNKQPNVFSTPQEEYDHSMGIAAKSVTRNSSRVV 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02899 296 MobiDBLite consensus disorder prediction 259 275 - -
Adu01g02899 296 MobiDBLite consensus disorder prediction 204 238 - -
Adu01g02899 296 MobiDBLite consensus disorder prediction 259 296 - -
Adu01g02899 296 Pfam MYB-CC type transfactor, LHEQLE motif 99 145 IPR025756 -
Adu01g02899 296 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7 9 289 - -
Adu01g02899 296 SUPERFAMILY Homeodomain-like 12 67 IPR009057 -
Adu01g02899 296 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 13 68 IPR006447 GO:0003677
Adu01g02899 296 Coils Coil 102 122 - -
Adu01g02899 296 Pfam Myb-like DNA-binding domain 16 66 IPR001005 -
Adu01g02899 296 Gene3D - 12 71 - -
Adu01g02899 296 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 70 IPR017930 -
Adu01g02899 296 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 9 289 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02899 Adu-Chr1 99512398 99514195 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02899 48 264 G2-like Transcription Factor Family AT2G01060 64.977 5.25e-87 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Adu01g02899 Myb_DNA-binding 6.8e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02899 - - aip:107637104 550.436