Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02874 ATGGGGAATGTGAATGTCAATAATCATAATAATAACGGTGCTACTCATTCAGAAGAAGACGACGAAGACGATGAAGCTTCTTCTTCGGGTACTCTTCCCACACCTCCCACCGAATTGATGGGTCAATCTCCACCCACAAGCCCCAGAGCTACCCATTCTCCCTTCATCTTCGCTCCTCAAGCTCCGGTGGTTCCACTACAGAGACCAGATGAGATGCATATTCCAAGTCAATCCTGGTTGCAATCTACCTCAGGGTATGAAGACATGTACAGTGAACTCGGAATTCCAACAATGATTACCTGGAGTTATGGTGGGAAAGAAGTAGCTGTGGAAGGGTCATGGGATAGTTGGAAAACAAGAATACCATTGCAGAGGTCAGGGAAAGACTTCACAATAATGAAGGTACTGCCTTCTGGTGTTTACCAATATAGATTTATTGTGGATGGACGGTGGAGGTACACTCCGGACTCGCCATGGACACAAGATGATGCAGGGAATGCTTACAATATCTTAGACTTGCAGGATTATGTTCCTGAGGACATTGAAAGCATCTCTAGTTTTGAACCTCCTCAATCACCAGACTCAAGTTATAGCAGTTTACAGCTTAGTTCTGATGATTATGCAAAGGAACCACCATTGGTTCCCCCACACTTGCAAATGACATTGCTAAATGTTCCAGTGACAAATATGGAAACGCAACCTCCTATGTCAAGACCTCAACATGGAGTGCTCAATCATCTTTACATGCAGAAAAGAAAGAGCACTCCTTCAGTGGTTGCGCTTGGCACAACGCATCGGTTTCTTGCCAAGTACGTCACTGTGGTGCTGTACAAGTCTCTGCCGAGGTAA 849 0.4511 MGNVNVNNHNNNGATHSEEDDEDDEASSSGTLPTPPTELMGQSPPTSPRATHSPFIFAPQAPVVPLQRPDEMHIPSQSWLQSTSGYEDMYSELGIPTMITWSYGGKEVAVEGSWDSWKTRIPLQRSGKDFTIMKVLPSGVYQYRFIVDGRWRYTPDSPWTQDDAGNAYNILDLQDYVPEDIESISSFEPPQSPDSSYSSLQLSSDDYAKEPPLVPPHLQMTLLNVPVTNMETQPPMSRPQHGVLNHLYMQKRKSTPSVVALGTTHRFLAKYVTVVLYKSLPR 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02874 282 SMART AMPKBI_2 190 280 IPR006828 GO:0005515
Adu01g02874 282 Pfam Glycogen recognition site of AMP-activated protein kinase 95 174 IPR032640 -
Adu01g02874 282 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-2 1 280 - -
Adu01g02874 282 MobiDBLite consensus disorder prediction 28 50 - -
Adu01g02874 282 SUPERFAMILY E set domains 95 180 IPR014756 -
Adu01g02874 282 CDD E_set_AMPKbeta_like_N 96 172 - -
Adu01g02874 282 Gene3D - 183 280 - -
Adu01g02874 282 Gene3D Immunoglobulins 90 177 IPR013783 -
Adu01g02874 282 MobiDBLite consensus disorder prediction 1 54 - -
Adu01g02874 282 Pfam 5'-AMP-activated protein kinase beta subunit, interaction domain 208 278 IPR006828 GO:0005515
Adu01g02874 282 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 1 280 IPR043554 -
Adu01g02874 282 SUPERFAMILY AMPKBI-like 177 279 IPR037256 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02874 Adu-Chr1 99111819 99114720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02874 105 175 Protein tyrosine phosphatase (PTP) family AT3G01510 35.616 3.16e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02874 K07199 - gmx:100777497 424.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g02874 01 99111819 99114720 Adu04g00521 04 6393565 6396848 PCT