Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02868 ATGGGGATTGATGAGGCACAAGAGTCATTGCTTGCAAGAGATCATTATCATGAGAAAAGTGACCTCCAGAGAAGAAGGTCCACCAGGAATTATGGCACAGCTTCATCAGATTCATCGTCACAGACATTCAACAATCTCCAACAAAATAACAGTAATCATGTAGTTATAGTCCAAAATAATAATAATAATAATAATAATAATAACCCTTCAACAGAACAAGCAGAATTTCAATTGAAACCAGTGTTGTTGTGGCTAACAATGTACCTAGGTGGAGGTACCCTATGCTTCTATATGACAAGTAACCAAATTGAAGGTACAAAAACCAATCCCTTTCTTGATGCACTTTACTTGTGTGTTGTGACAATGACCACTGTGGGTTATGGAGATCTTGTCCCTAAAAGCACAGTGGCAAAACTACTTGCATGCTTCTACGTCTTCACCGGAATGGCCCTCGTTGGTTTGATTCTTAACAAAGCAGCAGATTACATTGTTGAGAAGCAAGAAATGTTGGTTGTTAAGGCCATGCACAAAGAGCTTGACAAAGAGTTTCAATCTAACAACAATAGCAACAAGGCCAAACACAAGTTCTTGGTTGCAATTTGCACCTTCTTGGTGCTTATTACAGTGGGAATGATTTTCCTATCTTGGGTTGAGGATCTTGATTTTGTGGATGCATTGTATTGTGTTTGTTCCACAGTGACAACTTTGGGTTATGGGGATAAGAGTTTTTCAACTGGAATTGGTCGTGCTTTTGCAGTGTTTTGGATATTGAGTAGCACCATTTGCTTAGCTCAATGTTTTGCATATCTTGCTGAAATGCACACTGATGAAAGACAAAGATCACTTGCCAAAATGATTCTTTCTAGGAAAATCTCACGTCCTGATCTTGAAGCTGCTGATCTTGATGGAGACAAATCTGTTAGTGCTGCAGAGTTTGTTGTATACAAGTTGAAGGAAATGGGAAAGATCAACGATGAAGATGTTTCCGATGTATTGGAATGGTTTAGAAAACTAGATGTAGATAAATCAGGAACTCTGACAGAAGCTGATATCATTTGA 1059 0.3853 MGIDEAQESLLARDHYHEKSDLQRRRSTRNYGTASSDSSSQTFNNLQQNNSNHVVIVQNNNNNNNNNNPSTEQAEFQLKPVLLWLTMYLGGGTLCFYMTSNQIEGTKTNPFLDALYLCVVTMTTVGYGDLVPKSTVAKLLACFYVFTGMALVGLILNKAADYIVEKQEMLVVKAMHKELDKEFQSNNNSNKAKHKFLVAICTFLVLITVGMIFLSWVEDLDFVDALYCVCSTVTTLGYGDKSFSTGIGRAFAVFWILSSTICLAQCFAYLAEMHTDERQRSLAKMILSRKISRPDLEAADLDGDKSVSAAEFVVYKLKEMGKINDEDVSDVLEWFRKLDVDKSGTLTEADII 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02868 352 SUPERFAMILY Voltage-gated potassium channels 80 170 - -
Adu01g02868 352 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 37 350 IPR003280 GO:0005267|GO:0016020|GO:0071805
Adu01g02868 352 Pfam Ion channel 84 164 IPR013099 -
Adu01g02868 352 Pfam Ion channel 203 273 IPR013099 -
Adu01g02868 352 Gene3D - 76 174 - -
Adu01g02868 352 ProSitePatterns EF-hand calcium-binding domain. 339 351 IPR018247 -
Adu01g02868 352 ProSiteProfiles EF-hand calcium-binding domain profile. 326 352 IPR002048 GO:0005509
Adu01g02868 352 PRINTS Two pore domain K+ channel signature 234 243 IPR003280 GO:0005267|GO:0016020|GO:0071805
Adu01g02868 352 PRINTS Two pore domain K+ channel signature 120 148 IPR003280 GO:0005267|GO:0016020|GO:0071805
Adu01g02868 352 Gene3D - 175 294 - -
Adu01g02868 352 PANTHER OUTWARD RECTIFYING POTASSIUM CHANNEL PROTEIN 37 350 - -
Adu01g02868 352 Gene3D - 295 352 - -
Adu01g02868 352 MobiDBLite consensus disorder prediction 8 26 - -
Adu01g02868 352 MobiDBLite consensus disorder prediction 1 44 - -
Adu01g02868 352 SUPERFAMILY Voltage-gated potassium channels 189 289 - -
Adu01g02868 352 SUPERFAMILY EF-hand 296 351 IPR011992 -
Adu01g02868 352 MobiDBLite consensus disorder prediction 27 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02868 Adu-Chr1 98989281 98990419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02868 78 352 Ion Channels AT5G55630 55.714 1.20e-109 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02868 K05389 - gmx:100799492 419.853