Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02843 atggagCTCAGCCACAAGTCCGATGACCAGACCATAGAGTGGCTCCTCCGCCAGGCCGAGCCTTCAATCATCGCCGCCACCAGAACCACTTCCGCCAGCTTCTCCTCTGTTTTCGTCTCCATACGCGGGGGTGCTGGCTCTCTCTCTTCTCCTTCCTCAACCTCTGCAGCGTCTTCACTCGACCACAAGTCCTTGTTCGCCCCCACTCCCTTCATACTCGGTAAGCACATACGCACCGACGACGACGCTTTTGCCAAGGACAACGGCATCTCCGTGGGGCCCGCCATGGGTGGCTGCTCCTCCGCCGGAGATGGTTGTGCAGTCGGCGGCGGTGTCGGTGTCTTAGCAGCAACAAGCTTCTTTGTTCATTCACCATCAGCATTAGCAACAGCAACAAGCCATGGGAGAAGCTTCGGCGGCGAGGCTGGGAAATTACTTTCCTGGACATCTAAATTTGCTAGCTTTTTTGTCAAGAGAGCCCGAAAACTCCGGTCGGAGAGACGATGA 507 0.5602 MELSHKSDDQTIEWLLRQAEPSIIAATRTTSASFSSVFVSIRGGAGSLSSPSSTSAASSLDHKSLFAPTPFILGKHIRTDDDAFAKDNGISVGPAMGGCSSAGDGCAVGGGVGVLAATSFFVHSPSALATATSHGRSFGGEAGKLLSWTSKFASFFVKRARKLRSERR 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02843 168 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 2 103 IPR005333 GO:0003700
Adu01g02843 168 ProSiteProfiles TCP domain profile. 1 26 IPR017887 -
Adu01g02843 168 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 2 103 - -
Adu01g02843 168 Pfam TCP family transcription factor 2 54 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02843 Adu-Chr1 98719647 98720684 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02843 2 93 TCP Transcription Factor Family AT5G23280 56.701 3.17e-22 87.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Adu01g02843 TCP 2.2e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02843 K16221 - aip:107646651 110.153