Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02839 ATGGCTGGCTCATGCTTCCATGGGCTTCGCATGCGAAGATCAAAGAGTAAGCCTTTACCGGAGCTTCCTCCTTCATCGTCTTCCAAGAAAAGGATGAACTCTGACTTAGAGAACATGGAGAGAAAGAGATTTGACAGCTTGGAATCATGGTCCATGATATTGGACTCTGAGAATGTGGAGACATGGGAAGCTTCTAAGGAGGATCAGGAGGAGTGGACTGCAGATTTGTCACAGCTTTTCATAGGGAACAAGTTTGCATCTGGAGCTCACAGTAGAATCTACCGTGGAATTTACAAGCAGAGAGCCGTAGCTGTGAAAATGGTGAGGATCCCGACACAGGACGAGGAGAGAAGATCCTTGCTTGAGCAGCAGTTCAAATCTGAAGTTGCTTTGCTTTCACGTCTCTTTCACCCAAACATAGTTCAGTTTATTGCAGCTTGTAAAAAACCGCCAGTGTACTGTATCATAACAGAATACATGTCACAAGGAACTCTGAGGATGTATCTGAACAAGAAAGAGCCGTACTCTCTTTCAATTGAAACAATACTAAGGTTAGCTCTTGACATATCTAGGGGTATGGAGTACCTTCACTCGCAAGGCGTCATCCACAGAGATCTCAAGTCAAATAACCTTCTTCTCAATGATGAGATGAGGGTTAAGGTGGCAGATTTCGGCACATCTTGTCTCGAAACAAGGTGCCGGGAGACCAAAGGAAACATGGGAACGTATCGTTGGATGGCGCCAGAGATGATTAAGGAGAAACCTTACACTCGCAAAGTTGATGTGTATAGTTTTGGTATTGTGCTTTGGGAACTCACAACTGCTTTACTTCCCTTCCAAGGAATGACCCCTGTGCAAGCTGCTTTTGCTGTTGCTGAGAAGAATGAGAGGCCACCACTGCCGGCAAGTTGCCAGCCAGCACTAGCACACCTCATAAAGCGTTGCTGGGCGGCGAACCCATCGAAGAGGCCGGACTTCAGTGACATAGTGACCACTCTTGAGAAGTACGATGAATGTGTGAAGGAGGGACTTCCCCTAACTCATCATTCAAGACTTGTCAGCAGAAACCTCATTGAACGCTTAAAAGGCTGCGTCTCCATGAGTTCCTCCATACCTGTACATGCTTAA 1128 0.4628 MAGSCFHGLRMRRSKSKPLPELPPSSSSKKRMNSDLENMERKRFDSLESWSMILDSENVETWEASKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPTQDEERRSLLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSIETILRLALDISRGMEYLHSQGVIHRDLKSNNLLLNDEMRVKVADFGTSCLETRCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKNERPPLPASCQPALAHLIKRCWAANPSKRPDFSDIVTTLEKYDECVKEGLPLTHHSRLVSRNLIERLKGCVSMSSSIPVHA 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02839 375 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE ISOFORM X1 9 364 - -
Adu01g02839 375 SUPERFAMILY Protein kinase-like (PK-like) 56 333 IPR011009 -
Adu01g02839 375 ProSiteProfiles Protein kinase domain profile. 79 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g02839 375 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 9 364 - -
Adu01g02839 375 Gene3D Phosphorylase Kinase; domain 1 68 161 - -
Adu01g02839 375 CDD STKc_MAP3K-like 86 333 - -
Adu01g02839 375 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Adu01g02839 375 Pfam Protein tyrosine and serine/threonine kinase 81 333 IPR001245 GO:0004672|GO:0006468
Adu01g02839 375 MobiDBLite consensus disorder prediction 1 38 - -
Adu01g02839 375 Gene3D Transferase(Phosphotransferase) domain 1 162 359 - -
Adu01g02839 375 SMART serkin_6 79 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g02839 375 PRINTS Tyrosine kinase catalytic domain signature 241 251 IPR001245 GO:0004672|GO:0006468
Adu01g02839 375 PRINTS Tyrosine kinase catalytic domain signature 195 213 IPR001245 GO:0004672|GO:0006468
Adu01g02839 375 PRINTS Tyrosine kinase catalytic domain signature 260 282 IPR001245 GO:0004672|GO:0006468
Adu01g02839 375 PRINTS Tyrosine kinase catalytic domain signature 304 326 IPR001245 GO:0004672|GO:0006468
Adu01g02839 375 PRINTS Tyrosine kinase catalytic domain signature 157 170 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02839 Adu-Chr1 98626547 98629192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02839 1 375 MAP Kinase Kinase Kinase AT1G62400 82.097 0.0 643
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Adu01g02839 PK_Tyr_Ser-Thr 1.4e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02839 - - gmx:100799437 696.427