Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02833 ATGGGGAAATCAGGGGGTAGAAGAAAGAAGGGTGGTGGTTCAAACGCAAACTCAAACCCAAATTCAAACCAAGCCTCTGTTGATAGTTCAGCGGCACCACCACCACCACCAGTGGCTAATGGAGGAGTGGAGTTGGATTCTTCAATTTTTTTGAAGAGAGCGCATGAGCTGAAAGAGGAAGGGAATAAGCGATTTCAGAACAAGGATTATGCTGGCGCCCTTGAGCAGTATGATAATGCTCTTAGACTCACCCCAAAATCCCACCCAGACAGAGCCGTTTTCCATAGCAATAGAGCAGCTTGTTTAATGCAGATGAAGCCCATAGATTATGAAACTGTTATTGCTGAGTGCACCATGGCCCTTCAGGTCCAGCCTCGATTTGTCCGGGCACTCCTTCGAAGGGCCCGGGCTTTTGAGGCTGTAGGCAAGTATGAAATGGCTGTGCTAGATGTACAGACCTTGCTGGGAGCTGACCCTAATCACAGGGATGCTTTGGAGATTGCTCAGAGGTTGAAGACTGCATTGGGGCCTCGACAGGAGGCCCAGCAGGACCTCCACAGTCGCCCCTCCCCTGCTGCCCTTGGTGCTTCTGCTGTCCGTGGTGCCCCTATTGCTGGTCTAGGGCCATGTTTGCCAGCCCGGCCAGTGCAAAAGAAGGCTGCAAATTCAGCAGGTGCATCAGTTGTGTCGCCTAACAGCAAGCTAGACCGGCCACAAGCTGTTTCACCATCTGAAAATGGTCCTGATGGCAAGTCCCAGTTTCCAAAAGTTGTGTTGAAGTCTTCAAATGGTCCCGCGAAGCTTCCTAATATGAAACATGAAAACCAAAAGGAACACTCGTCTCATTTGTCCACTATTAATGGGCAGTGTCCGGAGGTCAGAGTTCGGTGGAGACCATTGAAGCTTGTTTATGACCATGACATTAGACTTTCCCAGATGCCAGTGAATTGCAGTTTTAGGGTTCTAAGAGATATAGTGAGCAAAAGGTTTCCTTCATCAAGTTCAGTTCTGATCAAGTACAAGGATAATGATGGTGATCTGGTTACTATAACCTCTACTGATGAACTTAGATTGGCAGAGTCTAGTGCTGATAGCCATCTTCTGAAAGAACCTGAAGCAGATAAAAGTGATTCCGTAGGGATGCTGAGACTACATATTGTTGAAGTTAGCCCTGAGCAAGAGCCTCTTCTGCTGGAAGAAGAGGAAGAGAAACCTGTTGAGAATGAGGAGATCAAGGTAGATGAGAGTGGGTCTCATTCATCTCCGAGTGAATCTGCCCATGAAGTTCCTGATACTGAGGTTGATAAGACAGGGAAGGAGGCTCCAAAACAAAAATCCGGAACCACAGAAGATGCTGAAAGCAAAGAAGTGGAGATGGATGACTGGTTGTTTGAGTTTGCTCAACTTTTCCGCTCACATGTTGGTATTGATCCAGATGCTCATATTGATTTGCATGAGCTTGGAATGGAACTCTGTTCAGAGGCACTTGAGGAAACAGTAACCAGTGAAGAGGCCCAGGAACTCTTTGACAAGGCTGCTTCGAAGTTCCAGGAGGTGGCCGCATTGGCATTCTTCAACTGGGGAAATGTTCACATGTGTGCAGCTAGAAAGCGGATCCCATTAGACGAGTCTGCCGGGAAGGACGTGGTAGCAGAACAGCTTCAAGTGGCTTATGACTGGGTCAAGGAAAAGTATTCTTTGGCAAGAGATAAGTACAATGAAGCACTCTTGATTAAACCAGACTTCTATGAGGGACTTTTGGCTCTTGGGCAGCAACAATTTGAAATGGCTAAACTTCGTTGGTCTTTTGCTCTGGCTAAGAAAATAGATTTATCAAGCTGGGATCCAACAGAGACGCTTGAACTTTTCGACAGTGCAGAGACCAAGATGAAATCTGCAACTGATATGTGGGAGAAGTTGGAGGAACAGAAAGCAAATGAGCAAAAGGACCCCAATTCGACAAAGAAAGATGATTTGTTGAGAAGAAGAAAGAAACAAGGTGGAGGGGCTGCTGAAGCTGAGTCCTCCGGTGTTGGTGGTCCGGGTGATATATCTCCAGAAGAAGCTGCTGAGCAAGCAGCCGTAATGAGATCCCAGATTCACCTCTTCTGGGGTAATATGCTTTTCGAAAGATCCCAAGTTGAATGCAAATTAGAGATGAGTGGTTGGAAGGAAAAACTGGAAGCTGCCACTGAACGCTTTAAGCTTGCTGGAGCTTCTGAAGCGGACATTTCAATGGTTCTAAAGAATCACTGCTCAAATGGAGATGCAAAAGAAGGAGATGATAAAAAGATTGACAATCCGCAACCCAGTAAGACTGCTGAAGTAGAGAACAATAAGTGA 2343 0.4656 MGKSGGRRKKGGGSNANSNPNSNQASVDSSAAPPPPPVANGGVELDSSIFLKRAHELKEEGNKRFQNKDYAGALEQYDNALRLTPKSHPDRAVFHSNRAACLMQMKPIDYETVIAECTMALQVQPRFVRALLRRARAFEAVGKYEMAVLDVQTLLGADPNHRDALEIAQRLKTALGPRQEAQQDLHSRPSPAALGASAVRGAPIAGLGPCLPARPVQKKAANSAGASVVSPNSKLDRPQAVSPSENGPDGKSQFPKVVLKSSNGPAKLPNMKHENQKEHSSHLSTINGQCPEVRVRWRPLKLVYDHDIRLSQMPVNCSFRVLRDIVSKRFPSSSSVLIKYKDNDGDLVTITSTDELRLAESSADSHLLKEPEADKSDSVGMLRLHIVEVSPEQEPLLLEEEEEKPVENEEIKVDESGSHSSPSESAHEVPDTEVDKTGKEAPKQKSGTTEDAESKEVEMDDWLFEFAQLFRSHVGIDPDAHIDLHELGMELCSEALEETVTSEEAQELFDKAASKFQEVAALAFFNWGNVHMCAARKRIPLDESAGKDVVAEQLQVAYDWVKEKYSLARDKYNEALLIKPDFYEGLLALGQQQFEMAKLRWSFALAKKIDLSSWDPTETLELFDSAETKMKSATDMWEKLEEQKANEQKDPNSTKKDDLLRRRKKQGGGAAEAESSGVGGPGDISPEEAAEQAAVMRSQIHLFWGNMLFERSQVECKLEMSGWKEKLEAATERFKLAGASEADISMVLKNHCSNGDAKEGDDKKIDNPQPSKTAEVENNK 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02833 780 ProSiteProfiles PB1 domain profile. 297 389 IPR000270 GO:0005515
Adu01g02833 780 MobiDBLite consensus disorder prediction 11 29 - -
Adu01g02833 780 ProSiteProfiles TPR repeat profile. 54 87 IPR019734 GO:0005515
Adu01g02833 780 MobiDBLite consensus disorder prediction 642 669 - -
Adu01g02833 780 MobiDBLite consensus disorder prediction 1 43 - -
Adu01g02833 780 MobiDBLite consensus disorder prediction 394 408 - -
Adu01g02833 780 MobiDBLite consensus disorder prediction 223 249 - -
Adu01g02833 780 Pfam PB1 domain 297 388 IPR000270 GO:0005515
Adu01g02833 780 MobiDBLite consensus disorder prediction 754 770 - -
Adu01g02833 780 SUPERFAMILY CAD & PB1 domains 294 367 - -
Adu01g02833 780 CDD PB1 300 369 - -
Adu01g02833 780 Gene3D Tetratricopeptide repeat domain 50 175 IPR011990 GO:0005515
Adu01g02833 780 SUPERFAMILY TPR-like 473 599 IPR011990 GO:0005515
Adu01g02833 780 SMART tpr_5 92 127 IPR019734 GO:0005515
Adu01g02833 780 SMART tpr_5 128 161 IPR019734 GO:0005515
Adu01g02833 780 SMART tpr_5 54 87 IPR019734 GO:0005515
Adu01g02833 780 Coils Coil 623 650 - -
Adu01g02833 780 Gene3D - 299 369 - -
Adu01g02833 780 MobiDBLite consensus disorder prediction 222 285 - -
Adu01g02833 780 MobiDBLite consensus disorder prediction 393 456 - -
Adu01g02833 780 MobiDBLite consensus disorder prediction 642 691 - -
Adu01g02833 780 MobiDBLite consensus disorder prediction 751 780 - -
Adu01g02833 780 SMART PB1_new 297 389 IPR000270 GO:0005515
Adu01g02833 780 MobiDBLite consensus disorder prediction 426 453 - -
Adu01g02833 780 PANTHER PROTEIN CLMP1 1 778 IPR044517 -
Adu01g02833 780 SUPERFAMILY TPR-like 51 185 IPR011990 GO:0005515
Adu01g02833 780 PANTHER - 1 778 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02833 Adu-Chr1 98569262 98572193 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02833 22 175 Calmodulin-binding Proteins AT3G25230 26.257 1.30e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02833 - - gmx:100786963 1158.28