Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02818 ATGTTCCCAACCTTGGGAGGGTTTTCTGCCACCGATCCATCCATGTCGTCAGATCATAACAATCGAGCGGTTGTGGGCGAAGTCGACTTCTTCAACACCTCATCATCCTCATCCGTTAAGAACCAGACTTGTACTCATGGAAGCCTTTCCGAGTTTAATCTCCACGTAAATACTGGTCTGCAACTCCTTACTGCCAACAGTAAAAGCGATCAATCTACGGTGGATGATGGGGTTTCATCAGACACTGAAGATAAGCGCCCAAAAACCACCCAGCTGGTACAAGTGCAAGAAGAACTCCAACGTGTGAATTCAGAGAACCAAAAGCTAAAGGAGACGCTCAACCATATGAGAAGTAGCTACATGAATTTGCAAATGCAAGTTGCCGCATTAATGCAACACCAACAGAAACAGCAAGTTTCCGAGACCACCACAGAAAATCATGAGGTAGGAAAAGTAAAAGGTGATGATGAGAAAAAGGAAGGGCGTAGTAGTGGAGGTGGAGGAATGATACCAAGACAGTTGCTTGATTTAGTTGCAAGTGGCACAGCCGAAGTAGACGATCAAGTATCTAATTCTTCTTCAGAAGAAAGAACTCGATCCAGCACACCTCAAAACCATAAAAACAGCAATGGCAAAATGGAGAATACTGGAGAGGATTTAGAATCATCACAACAAGGTTGGGATAATCCCAACAAGTTTCAGAGACTGAACCCTGCCACAGATCAATCCACTGCAGAAGCCACCATGCGAAAAGCTCGTGTCTCTGTCCGCGCCCGATCAGAAGCCCCTATGATCAGCGACGGGTGCCAATGGCGAAAATATGGACAAAAGATGGCTAAGGGAAACCCTTGTCCTCGAGCATATTACAGATGCACCATGGCAGTTGGTTGCCCAGTTCGGAAACAAGTTCAACGTTGTGCGGAGGATAGAACAATATTGATAACGACATACGAAGGGACGCACAACCACCCACTGCCGCCTGCTGCGATGGCGATGGCGTCCACAACGGCGGCGGCGGCTAGCATGCTTCTCTCTGGATCAATGTCAAGCGCTGACGGAATAATGAACTCGAGCATGATGGCCAGAGCGATTCTTCCGTCTTCAAGCATGGCAACGCTATCAGCATCAGCACCATTCCCAACCGTCACACTCGACCTCACGCACCAACCGAACGCGTTGCCTTTGCAGTACCACCAACGGCAACAACAACAACATCCTCACGCGCAATTGCCGCAAGTGATTGCACAAGCGCTCTATAACCAATCCAAATTCTCTGGCCTTCAATTGTCTCAAGATGTTGGTTCTTCCCAAGCTTCAAGGCTACCGTCGTTGCACCCTAACCAAAATAATCCCTTGCTCGCCGACAAGGTCAACGCCATCACCAACGATCCTAACTTCACGGCGGTCGTCGCAGCCGCCATTTCCTCCATCATCGGTGGGGCTCATCAAAATAACAACGCCAACAACTCCGACGCAAATCCCAATATCATCAACAGTGCTACAGTCGGCAGCTTTTCAGGAAATTAG 1527 0.4846 MFPTLGGFSATDPSMSSDHNNRAVVGEVDFFNTSSSSSVKNQTCTHGSLSEFNLHVNTGLQLLTANSKSDQSTVDDGVSSDTEDKRPKTTQLVQVQEELQRVNSENQKLKETLNHMRSSYMNLQMQVAALMQHQQKQQVSETTTENHEVGKVKGDDEKKEGRSSGGGGMIPRQLLDLVASGTAEVDDQVSNSSSEERTRSSTPQNHKNSNGKMENTGEDLESSQQGWDNPNKFQRLNPATDQSTAEATMRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRTILITTYEGTHNHPLPPAAMAMASTTAAAASMLLSGSMSSADGIMNSSMMARAILPSSSMATLSASAPFPTVTLDLTHQPNALPLQYHQRQQQQHPHAQLPQVIAQALYNQSKFSGLQLSQDVGSSQASRLPSLHPNQNNPLLADKVNAITNDPNFTAVVAAAISSIIGGAHQNNNANNSDANPNIINSATVGSFSGN 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02818 508 MobiDBLite consensus disorder prediction 146 163 - -
Adu01g02818 508 MobiDBLite consensus disorder prediction 1 20 - -
Adu01g02818 508 MobiDBLite consensus disorder prediction 485 508 - -
Adu01g02818 508 ProSiteProfiles WRKY domain profile. 260 326 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu01g02818 508 MobiDBLite consensus disorder prediction 131 171 - -
Adu01g02818 508 MobiDBLite consensus disorder prediction 183 259 - -
Adu01g02818 508 MobiDBLite consensus disorder prediction 67 88 - -
Adu01g02818 508 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 11 490 IPR044810 GO:0003700
Adu01g02818 508 MobiDBLite consensus disorder prediction 131 145 - -
Adu01g02818 508 SMART WRKY_cls 265 325 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu01g02818 508 PANTHER WRKY TRANSCRIPTION FACTOR 6 11 490 - -
Adu01g02818 508 Gene3D WRKY domain 250 327 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu01g02818 508 Pfam WRKY DNA -binding domain 267 324 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu01g02818 508 MobiDBLite consensus disorder prediction 184 249 - -
Adu01g02818 508 SUPERFAMILY WRKY DNA-binding domain 258 326 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu01g02818 508 Coils Coil 92 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02818 Adu-Chr1 98327046 98331494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02818 20 489 WRKY Transcription Factor Family AT1G62300 52.268 8.44e-138 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Adu01g02818 WRKY 5.1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02818 - - gmx:100127376 534.643