Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02816 ATGAAGTGTAGAAGGAGAAACACCATAGCTCGGAGCTCCATCTCCATAGCCACTACTCTCAACTCTAGTCAGGCTTTTGCTGTCAAGTCAGCGGACTTACATGACTACAAGCAACTCAAGACAACACAGAAAATTCTCTTCACACTCATCAGTCCTCAAATTGTGGCCTATAAAAGCTGTGATGTCACGATAGAGAATGGAATAATGCATGGCAATGTGAAGGGGCAGAATGACTTGGTGATAGCACAAGGAGCCAAGATAGCTGATTTCGGTTGCGCTCTTAGGTGGTGGCTGATGGTGAAGCACTATCTACATGATAATGACCTTGTTACGGTACTTTATCGGATTCGTTTCTGGGATGAGGTGCCGAAAATTCCAAACCATGTCTCAGAGGAAGAAAAAGATTTCTTGACGAAATATTACAAGAGAGACCCTAGTGAGAGGGGGTTGGTTGAGGAACTTCTTGTGCATGGATTTGTTCATGCCTTTAATGAGCATACTGATTATAAGCTCGAGTTGGGTAGCTTTGAGCCTCTGATTTACATACTCCCATGGGTGTGTTGGAGACTGAGCAGGACTATACACATACAGCAACATCCGATTGTTGTCATTGTTCGAAAAGTCCTGTTAATTCTACTTTTATCTATGCTTCCTTCACTGATACTCACCGGTACTAAAATAGGCTGCACTTTTTTATTGCTTCCACCAACCCAATCATACAAAGTGAGCCATATATACTTTATGGAGTGTGGAAGGAAAAACACCATAGTTCGGACCTCCACCACCATCGTCTCCATAGCCACTACTCTCAACTCTAGTCAGACTTTTGGGCGGACTTACATCGACAAGCAGCTCAAGACAGAACAGGAGATTCTCTCCAAACTCAACTATTCTCAAATTGTAGGCAATAAGGACTGCCACGCTAGAGAACGGAAAATGGTACATCTTTTAACAACGTTTTCATGGAGTACGCCAACCATGGCTTACGCCATTAGAAGGCACACGGGAATAGTGTATGGCGATGTGAAGGAGCAGAATGACTTGGTGACAACACAACGAGTCAAGATAGCTGATTTTGATTGTACTATTAGGGTTGTGGCTGATGTGAGGGCTAGCCACTTTGGCACTATCTACATGATAATGACCCTTTTACGGTACTTTATCGGACTAGTTTCTGGAATGAAGTACCAGAAATTTTATGCCATGTCTCAGAATAAGGAAAGGATTTCATGGCAAAATGTTTCAAGAGAGACCTCGTGA 1260 0.4302 MKCRRRNTIARSSISIATTLNSSQAFAVKSADLHDYKQLKTTQKILFTLISPQIVAYKSCDVTIENGIMHGNVKGQNDLVIAQGAKIADFGCALRWWLMVKHYLHDNDLVTVLYRIRFWDEVPKIPNHVSEEEKDFLTKYYKRDPSERGLVEELLVHGFVHAFNEHTDYKLELGSFEPLIYILPWVCWRLSRTIHIQQHPIVVIVRKVLLILLLSMLPSLILTGTKIGCTFLLLPPTQSYKVSHIYFMECGRKNTIVRTSTTIVSIATTLNSSQTFGRTYIDKQLKTEQEILSKLNYSQIVGNKDCHARERKMVHLLTTFSWSTPTMAYAIRRHTGIVYGDVKEQNDLVTTQRVKIADFDCTIRVVADVRASHFGTIYMIMTLLRYFIGLVSGMKYQKFYAMSQNKERISWQNVSRETS 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02816 419 SUPERFAMILY Protein kinase-like (PK-like) 280 387 IPR011009 -
Adu01g02816 419 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 335 376 - -
Adu01g02816 419 PANTHER MAP KINASE KINASE KINASE 335 376 - -
Adu01g02816 419 PANTHER MAP KINASE KINASE KINASE 4 68 - -
Adu01g02816 419 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 4 68 - -
Adu01g02816 419 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 248 309 - -
Adu01g02816 419 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 107 163 - -
Adu01g02816 419 Gene3D Transferase(Phosphotransferase) domain 1 55 173 - -
Adu01g02816 419 SUPERFAMILY Protein kinase-like (PK-like) 17 189 IPR011009 -
Adu01g02816 419 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 66 95 - -
Adu01g02816 419 PANTHER MAP KINASE KINASE KINASE 66 95 - -
Adu01g02816 419 PANTHER MAP KINASE KINASE KINASE 107 163 - -
Adu01g02816 419 PANTHER MAP KINASE KINASE KINASE 248 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02816 Adu-Chr1 98306924 98309314 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02816 1 160 MAP Kinase Kinase Kinase AT1G05100 26.136 5.53e-15 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02816 K20716 - ahf:112721951 153.68