Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02775 ATGAAGTCCCTCTTATATCCGACCCTGTTGTCATTGCTGCATTGGCACGTGGCGGTGGTATCAGCTGCAAGGCTGAACATGGCTAGCGATGAATCGGCCTTGGTTGCCATGAGGGAGCATTTTAACTCCTTGGATCCCAACAATGTGCTCGCAAGCAACTGGTCTAGCACTACCTCTGTTTGCAACTGGATTGGCGTCACATGCGGCTCTTCCCACCGCAGAGTAACTGCCTTGAATCTCTCATACATGGCTCTTCATGCCACCATCCCTCCGCATCTTGGAAACCTGTCATTCCTTTCTCGCCTGCATCTTCCCAACAATAGCTTCCATGGTACTCTACCTGCTGATCTAGCTGGATTACGTAGACTGAGGATCATCAACCTCAGATTCAACAAATTCACAGGAAGCATCCCGTCCTGGTTTGAAACTCTACCCAAACTAGAATACCTGCTACTGACAGGGAACAGTTTCTCTGGCACAGTCCCACACTTTCTGTTCAACATGACTTCCCTGCAATATCTTGTACTTTCTGATAACCAGTTTTGGGGTCCCTTACCTTCCAACATTTTCTTGTCTCCTTCTTTGCAATATGTGTTTCTTACTCACAACCAAATTTCAGGAGCTATCCCTTCAGCTATCATCAACAGTTCGTTACTGCAGGTTATTGAACTCAACTACAACAACCTATCCGGACAACTGCCGGAGCGCATCTTCCACCATCTTCCAAACTTGAAAGGGCTTTACGTGACTAGTAATTCCTTATCCGGTGAACTTCCACGCAGTTTGTTCGATTGCAAGCAACTGCAATATTTATCCTTATCCTACAACACCTTCGGTGGAAACATACCATCTGCCATCGGGAATTTGACAAGCCTCAAAGAGATCTATCTTGGCTATAACAATTTCAGAGGTGCAATACCATATGAGTTTGGTAATCTACGTAGTTTAGAGATTCTGAGTCTTCCTTTCGCCAATGTGAGTGGCTACATTCCGCCATCAATCTATAATAGTTCTACCCTACAGGTAATTAGTATTACTGGAAATCATTTATCAGGCAGCCTGCCAGCAAGCCTAGGCTCCATGCTTCCAAAACTTGTTGGGCTGTACATGGGGATTAATTATCTCAGTGGAAGAATCCCAAGCTCCTTATGCAATGCCACTATGCTTAATACCATAGATTTGGCTTACAATTCATTTTCTGGATACATTCCAGACATTTTTGGCAGCTTAAGAAGTCTCCAGCTGCTCAATCTTGGTAAAAATAATTTGACAAGTGATTCATCCGATTCAGAGCTAAGCATTATAAATTCTTTGACAAATTGTAGATTTCTCAAAGAGTTGACATTTTCTCGAAATCCATTGGATTCCATTCTTCCAATATCGGTAGGAAACCTTTCTACTTCTCTGGTTGACTTGAATCTTCGGGGTTGTTCAATGAGAGGCACCATTCCAGCAAGTATTGGCAACTTGAGCAGCTTGATAAAACTTGACCTTGGTACTAATAATTTTGTTGGAACCTTTCCTACTAGCATAGGGAAATTAATAAAGCTACAAGGCTTCTATTTACATGACAACCAATTGGAAGGATTTGTTCCGAATCAATTGTGTCAATTAACGAGCTTGGATTCATTTGCCGTTAAAAGCAACAAGTTCTCTGGCCCTATACCTTCTTGCTTAGGGAATCTTACCTCATTGAGATGGCTTTGGCTTTCTTCAAATGAATTCAACTCAATACCTTCCACCTTGTGGGAGCTGTCCAATTTATTGCATTTAGACTTATCTTCCAATAATTTAAGTGGATATCTCCCATTAGAGAGTGGAAATCTAAAAGCCATAAGTTGGATGTATTTATCAGGAAATCAATTTTCAGGTAGCATCCCAAGAAGCCTCAGCAATCTTATGAATTTGGCTCTTCTTACCTTAGCAAGAAACAAATTTGAAGGGCCCATCCCAGAATCATTTGGTCGTATGGTAAGTTTGGAACTCCTTGATTTATCAGAAAATAACTTGTTTGGTGTCATTCCCAAAACATTGGAGGCACTTATATATCTGAAATATTTCAATATTTCTCACAATAAGTTAAAAGGAAAAATCCCTGATGGGGGACCTTTTGCAAACTTCTCAGCTCAGTCGTTCATGGGGAATAAAGGGTTATGTGGTGCTCCACGTTTCCATTTTTCGGAATGTAAAATTGAAAAATCCCGAAAATGGAATGCACATATTGTGTTGACATATATTTTACCTGCAGCAATAGTTGCCACCCTTCTTGTGGCATTCCTTTGCATCCTAAAATTCCGGAAGCACAAGGTGGTCAACAATTCAGAGGTGAATCAATCAGAAGCAAGATGGAGAAGAATATCATACTATGAAATTCAGCAAGCAACAGATAGGTTCAATGATGGCAACTTGCTTGGTGTAGGGAGTTTTGGAAGAGTGTATAAAGGAGTACTCTCAGATGGGACGAATGTTGCAGTAAAAGTGTATAATCTGGGGCTAGAAGGAGCATTTAGGAGTTTTGACGCTGAATGTGAGATATTGCGCAGTGTCCGCCATCGAAACTTAACCAAAATCATTAGCAGCTGCAGCAACATGGACTTCAAGGCATTGATCCTAAGCCTCATGCCTAATGGGAGTTTAGAGAGGTGGCTACACTCGGAACACCATGGCTTGAGTATGATCCAGAGGCTAAACATAATGATAGATGTTGCAGAAGCAATGGATTACCTGCATAATGGTGGTTCTGTACCAATTATACACTGTGATTTGAAACCCAGCAACATATTACTAGATGAAGACATGGTTGCCCATGTGGCTGATTTTGGCATTGCAAAATTGCTGAGTGGGGATGACTCCATCACTCAAACCATGAATCTAGCCACAATAGGCTATATGGCCCCTGAATATGGACTTGAGGGAAGAGTGTCTAGGCAAGGTGATGTGTATAGCTATGGAATTTTACTTATGGAGACCTTCACACAGAAAAAACCCACTGATGAAATGTTTGTGGGAGAGTTTAGCATCAAAGAGTGGGTGAAAATGTCGTGCCCTGATTCACTACTTGATATCATTGATGCAAAATTATTGGTGGAAGAAGGAGAAACAGATACTAAACAGGACTGCTTGTTGTCTATAATGACTTTAGCTCTGAATTGCTCAGCTGAGTCTCCGGTTGAAAGGACAAGAATGAAAGACGCTATGAATGCTCTTAAGAAGATTAAAAGATTACTCTTGAACTAA 3237 0.4137 MKSLLYPTLLSLLHWHVAVVSAARLNMASDESALVAMREHFNSLDPNNVLASNWSSTTSVCNWIGVTCGSSHRRVTALNLSYMALHATIPPHLGNLSFLSRLHLPNNSFHGTLPADLAGLRRLRIINLRFNKFTGSIPSWFETLPKLEYLLLTGNSFSGTVPHFLFNMTSLQYLVLSDNQFWGPLPSNIFLSPSLQYVFLTHNQISGAIPSAIINSSLLQVIELNYNNLSGQLPERIFHHLPNLKGLYVTSNSLSGELPRSLFDCKQLQYLSLSYNTFGGNIPSAIGNLTSLKEIYLGYNNFRGAIPYEFGNLRSLEILSLPFANVSGYIPPSIYNSSTLQVISITGNHLSGSLPASLGSMLPKLVGLYMGINYLSGRIPSSLCNATMLNTIDLAYNSFSGYIPDIFGSLRSLQLLNLGKNNLTSDSSDSELSIINSLTNCRFLKELTFSRNPLDSILPISVGNLSTSLVDLNLRGCSMRGTIPASIGNLSSLIKLDLGTNNFVGTFPTSIGKLIKLQGFYLHDNQLEGFVPNQLCQLTSLDSFAVKSNKFSGPIPSCLGNLTSLRWLWLSSNEFNSIPSTLWELSNLLHLDLSSNNLSGYLPLESGNLKAISWMYLSGNQFSGSIPRSLSNLMNLALLTLARNKFEGPIPESFGRMVSLELLDLSENNLFGVIPKTLEALIYLKYFNISHNKLKGKIPDGGPFANFSAQSFMGNKGLCGAPRFHFSECKIEKSRKWNAHIVLTYILPAAIVATLLVAFLCILKFRKHKVVNNSEVNQSEARWRRISYYEIQQATDRFNDGNLLGVGSFGRVYKGVLSDGTNVAVKVYNLGLEGAFRSFDAECEILRSVRHRNLTKIISSCSNMDFKALILSLMPNGSLERWLHSEHHGLSMIQRLNIMIDVAEAMDYLHNGGSVPIIHCDLKPSNILLDEDMVAHVADFGIAKLLSGDDSITQTMNLATIGYMAPEYGLEGRVSRQGDVYSYGILLMETFTQKKPTDEMFVGEFSIKEWVKMSCPDSLLDIIDAKLLVEEGETDTKQDCLLSIMTLALNCSAESPVERTRMKDAMNALKKIKRLLLN 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02775 1078 Pfam Protein tyrosine and serine/threonine kinase 802 1067 IPR001245 GO:0004672|GO:0006468
Adu01g02775 1078 PRINTS Leucine-rich repeat signature 588 601 - -
Adu01g02775 1078 PRINTS Leucine-rich repeat signature 657 670 - -
Adu01g02775 1078 SMART LRR_typ_2 410 433 IPR003591 -
Adu01g02775 1078 SMART LRR_typ_2 217 240 IPR003591 -
Adu01g02775 1078 SMART LRR_typ_2 289 312 IPR003591 -
Adu01g02775 1078 SMART LRR_typ_2 514 538 IPR003591 -
Adu01g02775 1078 SMART LRR_typ_2 120 143 IPR003591 -
Adu01g02775 1078 SMART LRR_typ_2 241 265 IPR003591 -
Adu01g02775 1078 SMART LRR_typ_2 657 680 IPR003591 -
Adu01g02775 1078 SMART LRR_typ_2 562 584 IPR003591 -
Adu01g02775 1078 SMART LRR_typ_2 168 192 IPR003591 -
Adu01g02775 1078 SMART LRR_typ_2 585 609 IPR003591 -
Adu01g02775 1078 Pfam Leucine rich repeat N-terminal domain 28 68 IPR013210 -
Adu01g02775 1078 ProSitePatterns Serine/Threonine protein kinases active-site signature. 917 929 IPR008271 GO:0004672|GO:0006468
Adu01g02775 1078 Gene3D Transferase(Phosphotransferase) domain 1 874 1076 - -
Adu01g02775 1078 ProSiteProfiles Protein kinase domain profile. 798 1076 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g02775 1078 Gene3D Ribonuclease Inhibitor 188 428 IPR032675 -
Adu01g02775 1078 Gene3D Ribonuclease Inhibitor 429 738 IPR032675 -
Adu01g02775 1078 Pfam Leucine rich repeat 121 181 IPR001611 GO:0005515
Adu01g02775 1078 Pfam Leucine rich repeat 635 694 IPR001611 GO:0005515
Adu01g02775 1078 Pfam Leucine rich repeat 267 321 IPR001611 GO:0005515
Adu01g02775 1078 Pfam Leucine rich repeat 193 254 IPR001611 GO:0005515
Adu01g02775 1078 Pfam Leucine rich repeat 564 622 IPR001611 GO:0005515
Adu01g02775 1078 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 146 283 - -
Adu01g02775 1078 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 4 144 - -
Adu01g02775 1078 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 265 1073 - -
Adu01g02775 1078 Gene3D Phosphorylase Kinase; domain 1 768 872 - -
Adu01g02775 1078 ProSitePatterns Protein kinases ATP-binding region signature. 804 826 IPR017441 GO:0005524
Adu01g02775 1078 SMART serkin_6 798 1076 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g02775 1078 SUPERFAMILY Protein kinase-like (PK-like) 772 1069 IPR011009 -
Adu01g02775 1078 SUPERFAMILY RNI-like 78 424 - -
Adu01g02775 1078 Gene3D Ribonuclease Inhibitor 27 187 IPR032675 -
Adu01g02775 1078 SUPERFAMILY RNI-like 343 699 - -
Adu01g02775 1078 ProSiteProfiles Leucine-rich repeat profile. 564 586 IPR001611 GO:0005515
Adu01g02775 1078 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 146 283 - -
Adu01g02775 1078 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 4 144 - -
Adu01g02775 1078 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 265 1073 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02775 Adu-Chr1 97866163 97869615 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02775 610 715 Receptor kinase-like Gene Family AT3G47570 33.645 7.33e-06 48.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Adu01g02775 PK_Tyr_Ser-Thr 1.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02775 - K13420 aip:107613554 1936.38