Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02770 ATGCCCACTTCCGACGACTGCTCCGATGACGCCTGCAGCATTTGTCTTGAACCCTACACCGCCAACGACCCCGCCACTATTACCAGTTGCAAACATGATTATCATCTGCATTGTATTATTGAATGGTCACAGAGAAGCAAAGAGTGCCCAATATGTTGGCAGTTACTTAGCTTAAAAGACCCCACCAGCCAAGAGCTTCTAGCTGCAGTGGAGGCTGAAAAACGCTTAATATCCAGGAATGAACATTCATCTTCATACGCCAGCTCTCCTAGTCCCCTTGAACGACTCAATGATGATCATGATTATCCTTGTTCAGATGACTCTGATCTTGATGAGCAACTTATGCAACACCTAGATGCTACTGCAGCAAGCACAACTGGTCATATTCACACACGAAAAAGGCAGAGATATTATGGTGCAGGTCCATCAGAGGTGCTTGTTTCAAATTCTTCTATTCCAGCTTCTAGGATTCAGCCACCATCTGAGGGTAGTGTTTCATCATCTTCTGAGAGTGAAGTCTCTTTAAAGCCCAGCTGGCAACCACTTGAGAGTGATAGGAGAGTGAACACTGCTGAAATGTTCTCCTTCCCCAAGTCCATCAAGTCCAAATTTTCTGCTGCTTCGGCAAGATATAAGGAATCAATTTCAAAAAGCACTCGAGGCCTTAAAGAGAAGTTGATTGCTCATAATGCCTCAGTGAAAGAGCTCAGTAAAGGTGTTCGGCGTGAGATGAACGTAGGCATTGCTGGTGTTGCAAAGATGATCGAACGTCTTGATCTTTCGTCGAAACGGTCAAGTACCATCAGGCCAGTCAATGGTGGTAGGGGCATCTCTATCATCCCCTTCAAAGGGAAGTCTGTCCAGCAGAATAATGCCATTGAGCAGCAGCAATCTGGAGTTTTGGTTTGTCATATTAGTTCAGACTCTCCATCTCTTGTTCCTCCTCCAACTCCAAGTGTTCAGGAGTGA 969 0.4541 MPTSDDCSDDACSICLEPYTANDPATITSCKHDYHLHCIIEWSQRSKECPICWQLLSLKDPTSQELLAAVEAEKRLISRNEHSSSYASSPSPLERLNDDHDYPCSDDSDLDEQLMQHLDATAASTTGHIHTRKRQRYYGAGPSEVLVSNSSIPASRIQPPSEGSVSSSSESEVSLKPSWQPLESDRRVNTAEMFSFPKSIKSKFSAASARYKESISKSTRGLKEKLIAHNASVKELSKGVRREMNVGIAGVAKMIERLDLSSKRSSTIRPVNGGRGISIIPFKGKSVQQNNAIEQQQSGVLVCHISSDSPSLVPPPTPSVQE 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02770 322 MobiDBLite consensus disorder prediction 150 178 - -
Adu01g02770 322 Pfam Ring finger domain 11 52 IPR001841 -
Adu01g02770 322 MobiDBLite consensus disorder prediction 78 109 - -
Adu01g02770 322 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RHF1A 4 310 - -
Adu01g02770 322 ProSiteProfiles Zinc finger RING-type profile. 12 52 IPR001841 -
Adu01g02770 322 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 4 310 - -
Adu01g02770 322 SMART ring_2 12 52 IPR001841 -
Adu01g02770 322 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 68 IPR013083 -
Adu01g02770 322 SUPERFAMILY RING/U-box 7 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02770 Adu-Chr1 97818625 97820501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02770 3 60 C3H Transcription Factor Family AT5G15790 43.103 8.75e-13 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02770 K19043 - gmx:100775754 322.783