Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02700 ATGTCTAATGAGGATTATGTAGATGACACCAATAATGTTGACGGGTTTCACGGGAATTTGGAGAATCCCTTGAGAAACAGTGATGAGCTCCTGGACGACGATATCTTCATGGATGCTAACTTGGCAAATGCAGAAGTTGGTGCTTCTGAATCCAATGAAGGTACCCATTTTGATCAATTGGATGAATCTTATAAGATTGACGGGTGGGAGGACATAGGAAAGACTGAGTTCTTGAATATTGTAGATGTTGATATAAAAAGATATCATTTCAGTGATCTAGGAGTGGCTTTTGATTTCTACAATGCATTTGCCAAGTCAAAGGGATTTAGTGGTCGAAAAAGTAAGACGCGAAAGCACAATGGGATAATCAATCGACAGAATTTTGTTTGTTGTCGCGAGGGCTTCCGACGAAAAAAGGCAGATAATATGCATACCAGAAAACAAGAGCCTAGAGCTGAAACTAGATGTGGCTGTAAGGCAAAGGTTCAGGTGTCATTTGACGTTGTTAGTGGTCGCTGGATTGTTTCAAAATTTTCTGATTTGCATAATCATGACCTTCTTCCTCCAATTTTTACTGCAATGCTTCCTGGTCACAGAAAAATACCTGCTGCAGATATTGAGCAAATAAATATAATGAGGAAGGGTGGATTAGGCACTGCACATATTTTTGCAGCACTCTCAAGCCAATCTGGTGGTCACCACAATGTTCCCTTTTTGCCCAGGGACTTGTACAATCAAGTCGCACAGCAACGTCGACGATTGAAGGGTGATGCTAGTGCAGCTCTTCAATTTTTGAGGAAGATGAAGTCCATTGATCCTGTCATGGTTATAAGATATGAGGTTGATAGGTTCACATCGCAGTTTAAGAAGTGCATGCTGGGTGATTACGAGGTTGGTGTATTCCGTAGTAAGTGGGATCGGATGGTTGAAGAGTTTGATGTGCAAGACAAGCAATGGATAATTGATATGTATGATAACCGTCATAGTTGGGCAACAGCACATATCCGTGGGAAGTTCTTTGCTGGGTTTAGGACCACTTCTCGATGTGAGGGGTTGCACTCAGTTATTGCAAAGTATGTCAAGTCCAGATTGGTGGCTACACTATCAGCAGGTAAAGATGATAGGTTCAGGAGCATGAGGGATTGGGCGATAAACACAGTGGATAAAATGAAAGCCGATGATACTGCTAGTGCAGTTGCTTCTAATAGTGCAATTCCTGCCACTCATACAGATCCTCGTGACCCCCCAATTCGTAGAAGAGCTAAGGATCGTGCCGGACAACGGTGTAGTATATGCCGGGAGCTCGGACATAACAAAACTACATGTCCAGATCGGAGTAAGTATGATAGGGGTTCACATGAACGGCATAGTCTACTTACAGATGATGATGCATATGAGGCTATGTGGGATGAGGAAGAAGACTTCATTTATGAGGAAGATGAAGGTGAATGTGCGGTAAATTCTAGTTCTGAATCTAGCAGAGATCAAGATATGGAGATAGATGACTCTAATTATGAATTTGGAAATGAGGACGATGGAGCCAATGAAATTAATTAG 1557 0.42 MSNEDYVDDTNNVDGFHGNLENPLRNSDELLDDDIFMDANLANAEVGASESNEGTHFDQLDESYKIDGWEDIGKTEFLNIVDVDIKRYHFSDLGVAFDFYNAFAKSKGFSGRKSKTRKHNGIINRQNFVCCREGFRRKKADNMHTRKQEPRAETRCGCKAKVQVSFDVVSGRWIVSKFSDLHNHDLLPPIFTAMLPGHRKIPAADIEQINIMRKGGLGTAHIFAALSSQSGGHHNVPFLPRDLYNQVAQQRRRLKGDASAALQFLRKMKSIDPVMVIRYEVDRFTSQFKKCMLGDYEVGVFRSKWDRMVEEFDVQDKQWIIDMYDNRHSWATAHIRGKFFAGFRTTSRCEGLHSVIAKYVKSRLVATLSAGKDDRFRSMRDWAINTVDKMKADDTASAVASNSAIPATHTDPRDPPIRRRAKDRAGQRCSICRELGHNKTTCPDRSKYDRGSHERHSLLTDDDAYEAMWDEEEDFIYEEDEGECAVNSSSESSRDQDMEIDDSNYEFGNEDDGANEIN 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02700 518 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 277 362 IPR031052 GO:0006355
Adu01g02700 518 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 89 273 IPR031052 GO:0006355
Adu01g02700 518 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 89 273 - -
Adu01g02700 518 MobiDBLite consensus disorder prediction 395 425 - -
Adu01g02700 518 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 277 362 - -
Adu01g02700 518 SUPERFAMILY Retrovirus zinc finger-like domains 415 449 IPR036875 GO:0003676|GO:0008270
Adu01g02700 518 Pfam FAR1 DNA-binding domain 98 188 IPR004330 -
Adu01g02700 518 MobiDBLite consensus disorder prediction 478 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02700 Adu-Chr1 96518277 96520935 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu01g02700 FAR1 8.1e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02700 - - adu:107465142 584.719