Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02672 ATGCGGGGATGTTATAACAAAAACCTGTTCTTGTACCACCTCACTGTCATCACAAGAACCCCATCACCCTCCTTTCTGATCCCTTCATCCCCTTCCCCTGTTCGTGCTCCCAATTACAGCACACTCACAAAAACCCCGGAAATACAATCCTTTTCGGTGAATTACCTCGTCAACAAGTGCGGGTTCCTCCCAGATTCCGCTCTTCAGGCTTCAAAATACGTCCTTTTTAAGAGTCCCGAGAAACCCGACTCAGTCATCGCACTCTTCAGGAGCTTCGGTTTCTCAGATTTGCAGATTCACAATGTCATTCAGAAATCGCCCAGGGTTCTCCTCAGCAAGCCCAAAGAGACCATCTTGCCCAAGCTCCAGTTCCTCATCTCCAAAGGCGCTTCAAAATCACAACTTGCCCGCATCATCGAGCTCAACCCTGTAATCTTGCAAAGAAGCTTAAAGAAACACCTAATCCCCACTTTCGATTTGTTGAACAATTTCCTTCGTTCTGAAGAAAGGACCGTTGCTTCTATTTTACATTCTGTCCAAATTTTAACTTCTTCAACGTCGCATCGAAATCTTAATTTGCTGGTTGATTTAGGGGTCAGTGAGAGAAGCATGGCAAGGCTACTTCACCAATGGCCTTGGTTGCTTCGATTCAATTCTGCAGGCCTTAAGAGTATGGTAGATGAAGTCATTAAAATGGGGGTTGATCCCGCCAAGGCTAATTTTGTTCCTGCGTTGTATGCTAAGCTGCTTCCAAAGTCCATGTGGGATAGGAAAGTTGAGTTGTACAAGAGTTTTGGATTAACTGATGACAACATTCGTGAGGCTTTTGTGAAGCACCCTTTCTGTATGCTCAAATCTGTGCAGAAAATTGAGGCCTGCATTGAATTCTTTGTCAAAGAACTCGGTTGGAAGCCTGTTGATGTCACCAATTATCCGGTTCTTCTCTCGCTGAATTTGGAGAAAAGGCTTGTTCCCAGGGCTGCTGTCTTGAAGATTCTTATGGCCAATGGTGTCATTAAGAGTTGTCGGCATTTGTTAGCATATACTGTTTCGGAAGAGATGTTCTTTAAGAATTATGTGAATCGTGGGGAAGATGAATATAATTCTCTCCACATTTGTCTGTAA 1125 0.44 MRGCYNKNLFLYHLTVITRTPSPSFLIPSSPSPVRAPNYSTLTKTPEIQSFSVNYLVNKCGFLPDSALQASKYVLFKSPEKPDSVIALFRSFGFSDLQIHNVIQKSPRVLLSKPKETILPKLQFLISKGASKSQLARIIELNPVILQRSLKKHLIPTFDLLNNFLRSEERTVASILHSVQILTSSTSHRNLNLLVDLGVSERSMARLLHQWPWLLRFNSAGLKSMVDEVIKMGVDPAKANFVPALYAKLLPKSMWDRKVELYKSFGLTDDNIREAFVKHPFCMLKSVQKIEACIEFFVKELGWKPVDVTNYPVLLSLNLEKRLVPRAAVLKILMANGVIKSCRHLLAYTVSEEMFFKNYVNRGEDEYNSLHICL 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02672 374 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 45 367 - -
Adu01g02672 374 PANTHER CGI-12 PROTEIN-RELATED 45 367 IPR003690 GO:0003690|GO:0006355
Adu01g02672 374 Pfam mTERF 188 349 IPR003690 GO:0003690|GO:0006355
Adu01g02672 374 Pfam mTERF 87 218 IPR003690 GO:0003690|GO:0006355
Adu01g02672 374 Gene3D Transcription termination factor 3, mitochondrial 63 187 IPR038538 -
Adu01g02672 374 Gene3D Transcription termination factor 3, mitochondrial 188 371 IPR038538 -
Adu01g02672 374 SMART mt_12 136 167 IPR003690 GO:0003690|GO:0006355
Adu01g02672 374 SMART mt_12 273 304 IPR003690 GO:0003690|GO:0006355
Adu01g02672 374 SMART mt_12 305 336 IPR003690 GO:0003690|GO:0006355
Adu01g02672 374 SMART mt_12 205 235 IPR003690 GO:0003690|GO:0006355
Adu01g02672 374 SMART mt_12 100 131 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02672 Adu-Chr1 96140472 96141993 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Adu01g02672 mTERF 5.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02672 K15032 - pvy:116121303 256.144