Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02670 ATGTCAAACTCTAGAACCTCATCAGATACACTACACACTCCCTCCTTCATGAAGGGATATGAAGAAGCAAACAACAACAATCAAAACCAGAACCAAATATGCTTGTCTACACTTCTCCAAAGAAACACATCAACATCATCATCATCATGTGGTGAAAAAAGAGGGAGAAGGAAACAAGCAGAGCCAGGTAGGTTTCTTGGTGTGAGAAGAAGACCTTGGGGAAGATATGCTGCTGAGATCAGAGACCCTACAACCAAAGAAAGACATTGGCTTGGTACCTTTGACACTGCTCAAGAAGCTGCTCTTGCTTATGACAGAGCTGCTTTGTCCATGAAAGGAAACCAAGCTAGAACTAACTTCATCTATTCTGATAACATCAACTTCCATGCTCTTCTCACACCTATGGATCTTCAAGCTCTCTTGCCACCACCACCTCCTCCTCCTCCCCCACCATCTTCTTACACTAAACAACTTGCACCTTCCAATCAGAATAAGATTAAGAACAGTAATAGTAATACTAATGTTGTTGCTGCTGCATATGGTTGTTCAGTTCAGGATGATGATAACTTGTTCTTTTCAACAAGTGATCATCATAGTAATAACAACAACTCTGGGTATCTTGAATGCATAGTTCCTGATAAATGTTTCAGGCCTACTGCTACTACTACTGCTGATTCAAGTTCCAACAGTAGTTGTTCAAACAACAACAACTACTCATCAAGAAAGAGCAATGTCAGTGAAAACTCATCATCATTCTCTTGTGATAATAACTTTCCATCAGATTACTTCTGTTATCCAACAAGTGAAGGGTTCTCATCATGGGATTGGAGCTGCAGTGAGCTTTCAGCTATATTTAACAATTCATCATCATCATCATCATCATCATCAAGAAGGGTATTAGAAGGAGGAGGATGCATGGATGCACTGTATCCTATCATAACTGATGAGAACAATAATAACAATACAAGCTTCTATGATGGGGTGATGATGAATAATCATCATAATCATAATAATGCTGCTGCTTCATCTTCTTCAACAAACTGCTCAGTAGACATGGGATACCCACTCTTCTGA 1074 0.3957 MSNSRTSSDTLHTPSFMKGYEEANNNNQNQNQICLSTLLQRNTSTSSSSCGEKRGRRKQAEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAQEAALAYDRAALSMKGNQARTNFIYSDNINFHALLTPMDLQALLPPPPPPPPPPSSYTKQLAPSNQNKIKNSNSNTNVVAAAYGCSVQDDDNLFFSTSDHHSNNNNSGYLECIVPDKCFRPTATTTADSSSNSSCSNNNNYSSRKSNVSENSSSFSCDNNFPSDYFCYPTSEGFSSWDWSCSELSAIFNNSSSSSSSSSRRVLEGGGCMDALYPIITDENNNNNTSFYDGVMMNNHHNHNNAAASSSSTNCSVDMGYPLF 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02670 357 MobiDBLite consensus disorder prediction 138 155 - -
Adu01g02670 357 MobiDBLite consensus disorder prediction 43 66 - -
Adu01g02670 357 MobiDBLite consensus disorder prediction 138 170 - -
Adu01g02670 357 MobiDBLite consensus disorder prediction 156 170 - -
Adu01g02670 357 Pfam AP2 domain 67 113 IPR001471 GO:0003700|GO:0006355
Adu01g02670 357 MobiDBLite consensus disorder prediction 1 23 - -
Adu01g02670 357 SUPERFAMILY DNA-binding domain 65 122 IPR016177 GO:0003677
Adu01g02670 357 ProSiteProfiles AP2/ERF domain profile. 64 121 IPR001471 GO:0003700|GO:0006355
Adu01g02670 357 MobiDBLite consensus disorder prediction 51 65 - -
Adu01g02670 357 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 22 357 - -
Adu01g02670 357 SMART rav1_2 64 127 IPR001471 GO:0003700|GO:0006355
Adu01g02670 357 CDD AP2 64 120 IPR001471 GO:0003700|GO:0006355
Adu01g02670 357 Gene3D AP2/ERF domain 64 122 IPR036955 GO:0003700|GO:0006355
Adu01g02670 357 MobiDBLite consensus disorder prediction 221 240 - -
Adu01g02670 357 PRINTS Ethylene responsive element binding protein signature 65 76 IPR001471 GO:0003700|GO:0006355
Adu01g02670 357 PRINTS Ethylene responsive element binding protein signature 87 103 IPR001471 GO:0003700|GO:0006355
Adu01g02670 357 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF086 22 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02670 Adu-Chr1 96115567 96116739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02670 30 307 AP2-EREBP Transcription Factor Family AT5G18560 39.385 2.07e-56 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Adu01g02670 AP2 1.6e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02670 - - aip:110263494 578.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g02670 01 96115567 96116739 Adu10g00011 10 273974 275047 PCT