Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02668 ATGAAACAGAAAGCCAGTTGGAGTTGCAGTAATGCTAGTGTGAAGTCTGAAAGGCAAATTCCAATCAGATCCCTCCACAGAATCACTGTTACGCCTTCAATTCGCAATTTCAGTTCTCTACGATCGATTATGGCCCCTTCCAAAAAATCCAGAAGTGTAAATAAGAGGTTTCCTAATGTTCGTGAAGCTGCTTTGAGTAAAGATAAAAATGCAGAAAATGCTAGCAAGAATAAGCAGAAGGCAAGTCCTGGCACTCAGAAGAAGAGAAAATTGGCTGACATGTTAGGGCCACAATGGAGCAAGGAGGAACTTGAGCATTTCTATGAAGCTTACCGTAAATATGGAAAAGACTGGAAGAAGGTTTCTCTTGCAGTACGTAATAGATCCGTGGAAATGGTAGAAGCTTTGTACACAATGAACAGGGCATACTTATCTCTTCCAGAGGGCACTGCTTCTGTTGTTGGACTGATAGCAATGATGACGGATCATTATAGTGTACTGGGAGGAAGTGACAGTGAAAAGGAGAGCAATGAAGATGCAGAAGTATCTAAAAGGTCTCAAAAACGTTTGCGAAGAAAACAAATGAATGACCATAAAACATTAGAGGGACCCTTTTCAGATCATTCTCAATCACAATCTGTTGCATCAGGTGATGGTTGCTTGTCGCTGTTGAAGACTAGGAATTCTGGGCTTACTCCTCATGCTGTCAGAAAACGGACTCCTCGAGTACCTATTTCACATTCCATTGGTAAAGATAATGCAGAGAAGTTATTTTCATCTGCCAGACAGGGGCGCAAACAAATGGTTGATACTAATGATGTTACTCATAAGATTGCATTAGCATTGGCCGAGGCTTCACAAAGAGGTGGCTCCTCAAAAATTTCTGCGTCTCCAAACAAGAGAGCAGCGCCATCACCTAGTAAGAAAAGTGGGAAGAAGGTTAAATCAGAAATAGCTGGATCCAAGTTTTGCAGTTCTGATTTGGATGGGGGTAGTTCTGAATTGAGTTTAGGAAGCACAGAAGGAGACAATGGAGATTATAATAGAAAAACAGTTAATTGGACAAGTAGGGAAAACACTGGAAAAGGAAGGAGTCGAGAAAAGAGAGTAAAACACACTGGGAACAATTTAGAACCTGAGGAAAGTTTAAACATGCATTTGGATGAGATAAAGGAAGCCTCAAGTGGGACAGATGATGGTAAAAATCTGAATTTTATCAAATCAAATTTTAGCACTGATTTTGCAAATGCAAAGAATCCAAGTCCCTCTTCTTACAAGGGTTCAAAGAAGAGAAGTAAAAAACTACAGGTTGAGAAAGATGAAGCTTCGGCTTTTGATGCTCTGAAAACTTTGGCTGATCTGTCTTTGATGATGCCTGTTACGAATGCTGACAGTGAGTCATCAGCACAGGTCAGAGAAGGAAACCATGATGTTGAGGAGTCTAAAGTGAAAATGCATAAGGCAACTAAGATTGAAAGAACTGCTTCAAGTGCATTAGGCAAGATCTTCTCTGACGGAGCTGCTATTCCTGAAGGGGAGGGTGTGAACCAGCTTAATGCAGGAATCAGGAAAAGGAAACAGAAATCTTTTAGCCTAAACAATGATGAAACACATACTGATTCTCACCTCAGTGGCTCCCAGAAAATCAAGGATACTGATGAGGTCAAGAAATCAATGGTTAAAGGTAAGCGATCATCTGTTTCTACAACATATCCAAGACAACCAAAGGTAGTTAAATCCCCGGGAAAGATGTCTTCAAGTGGTAATGACAAAAGAGAAGGGGATGATTCAACTTCATCTCCCATAAAGGTTTCATCTGCTAACCAAGTCGGTCAAGTAAACAAAGGAAGGCCTAGAAGAAAAATGGGAAAACCAAAACCAATGGCAGAAGGAGATCCAGTGGTGTCTGGAAATATTTTCAGTAGTCAGCATAATAAATCCTGTGCTTCGGTCCAGAATAGTTCCTCTAGTCCCAAGAGGGAGTTCGTGGAGTACTTGGACCATGTTGGACTGGGTCATGTTCCTAGATTGACTCGTATCGAGTGGGGAGTCATTAGAAGTTCCCTTGGCAAACCGCGGAGATTTTCAGAGCAATTTTTGATAGAAGAAAAACAGAAGCTTAATCAATACCGAGAATCTGTTAGATCACATTATGCTGAAGTTCTTGCTGGTACCAAGGAAGGCCTTCCTACTGATTTGGCTCGGCCATTAATTGTTGGCCAGCGAGTTATTGCTATTCATCCGAAGACAAGAGAGATTCATAATGGAAGTATACTAACTGTTGACCATTGTCGGTGTCTGGTTCAGTTTGACCAGCGTGAACTCGGGGCTGAATTTGTTATGGATATAGATTGCATGCCTATGTATCCATTTGAAAATATGCCTACATCTATGGCAAGACACCACATTGCTCATTGTAGAATAAACGAGACCTTTAATGATCTCCGACTTAATGGAAAACTGAAACAAGAAATTATTGCTGATCACACAATATTGTCCCCTAGTGAGACTATAGATACTACTAAAGGTCTTCACATATTGCCCACTAAGCATGGAAGCAGTACTTTATCAAATCAGGGAGTTTCACCAAATTCCAAATCACAAGTGAAAGCTATGTGCAATCAGATTTGTAATGCTCAACAGGCACCGAGTTTGCAACCTTTTCCTTTTGAACATGTTCATTCAAAAGAAGCTGACATATCGGCTATTTCAGAGTTGACTCGCGCTCTTGACAAGAAGGAACTTGTGATGTCTGAACTGAAGGTCATGAATGATGGGGTTTCAGAAAGCCAGAAATATGGAGACAACTCATTGAAAGATTCAGAGCCTTTTAAGAGGAGTTATGCTTCACTGATAAAGCATTTAACTGAAGTTTCTTCTGCTTTGTTTCGCCTGAGGCAACGCAACACATATCAAGGCAGCACCACAGAATTATCACTAAAGCCCATAGCTAATTATGATGACCCTGGTGGTCAAGCTAGCTCCTCCAATTGTTCAGCATGTCATAACCAAGAATCTATACCTCTTGGCCATATAGCTGAAATTGTTGAAAGTTCTAGAAGAAAAGCCCGAGCAATGGTTGTTCAAGCTACACAGGCAATGTCAATATTTATGAAGACAGATAGTAAGGTTGAAAAGATCGAGGATGCTATAAATTTTATCAATAATCAGCTTTCAGTGGATGACCCTGCTGCTCCAGCCACAAATTCTCTGCCTGCTGATTCAATTCACGTCACTCTGGCTTCTCAGGATCAATTGACAGGAAACACATTAAATCCCTCAGTAAATTGTCATGCACAAGATGCCGAATTTAACAGTTCATCTGACCAAAATGAAATGAAAATTCCTTCAGAACTCATATCTCATTGTCTAGCTACACTGCTCATGATTCAGAAGTGCACGGAACGACAGTTCCCACCAGCTGATGTTGCTCAGGTACTAGATTCCGCTGTCACGAGTCTGCAGCCATTTTGCTCAAAGAACCTTCCAATATATGGGGAGATACAGAAATGCATGGGTATCATAAGAAACCAGATATTGGCACTCATACCAACTTAG 3558 0.4087 MKQKASWSCSNASVKSERQIPIRSLHRITVTPSIRNFSSLRSIMAPSKKSRSVNKRFPNVREAALSKDKNAENASKNKQKASPGTQKKRKLADMLGPQWSKEELEHFYEAYRKYGKDWKKVSLAVRNRSVEMVEALYTMNRAYLSLPEGTASVVGLIAMMTDHYSVLGGSDSEKESNEDAEVSKRSQKRLRRKQMNDHKTLEGPFSDHSQSQSVASGDGCLSLLKTRNSGLTPHAVRKRTPRVPISHSIGKDNAEKLFSSARQGRKQMVDTNDVTHKIALALAEASQRGGSSKISASPNKRAAPSPSKKSGKKVKSEIAGSKFCSSDLDGGSSELSLGSTEGDNGDYNRKTVNWTSRENTGKGRSREKRVKHTGNNLEPEESLNMHLDEIKEASSGTDDGKNLNFIKSNFSTDFANAKNPSPSSYKGSKKRSKKLQVEKDEASAFDALKTLADLSLMMPVTNADSESSAQVREGNHDVEESKVKMHKATKIERTASSALGKIFSDGAAIPEGEGVNQLNAGIRKRKQKSFSLNNDETHTDSHLSGSQKIKDTDEVKKSMVKGKRSSVSTTYPRQPKVVKSPGKMSSSGNDKREGDDSTSSPIKVSSANQVGQVNKGRPRRKMGKPKPMAEGDPVVSGNIFSSQHNKSCASVQNSSSSPKREFVEYLDHVGLGHVPRLTRIEWGVIRSSLGKPRRFSEQFLIEEKQKLNQYRESVRSHYAEVLAGTKEGLPTDLARPLIVGQRVIAIHPKTREIHNGSILTVDHCRCLVQFDQRELGAEFVMDIDCMPMYPFENMPTSMARHHIAHCRINETFNDLRLNGKLKQEIIADHTILSPSETIDTTKGLHILPTKHGSSTLSNQGVSPNSKSQVKAMCNQICNAQQAPSLQPFPFEHVHSKEADISAISELTRALDKKELVMSELKVMNDGVSESQKYGDNSLKDSEPFKRSYASLIKHLTEVSSALFRLRQRNTYQGSTTELSLKPIANYDDPGGQASSSNCSACHNQESIPLGHIAEIVESSRRKARAMVVQATQAMSIFMKTDSKVEKIEDAINFINNQLSVDDPAAPATNSLPADSIHVTLASQDQLTGNTLNPSVNCHAQDAEFNSSSDQNEMKIPSELISHCLATLLMIQKCTERQFPPADVAQVLDSAVTSLQPFCSKNLPIYGEIQKCMGIIRNQILALIPT 1185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02668 1185 MobiDBLite consensus disorder prediction 562 585 - -
Adu01g02668 1185 PANTHER PROTEIN ALWAYS EARLY 1-RELATED 44 655 IPR028306 -
Adu01g02668 1185 MobiDBLite consensus disorder prediction 285 382 - -
Adu01g02668 1185 MobiDBLite consensus disorder prediction 168 216 - -
Adu01g02668 1185 SUPERFAMILY Homeodomain-like 95 142 IPR009057 -
Adu01g02668 1185 SMART DIRP_2 657 749 IPR033471 -
Adu01g02668 1185 MobiDBLite consensus disorder prediction 416 439 - -
Adu01g02668 1185 MobiDBLite consensus disorder prediction 360 382 - -
Adu01g02668 1185 MobiDBLite consensus disorder prediction 66 91 - -
Adu01g02668 1185 MobiDBLite consensus disorder prediction 1 18 - -
Adu01g02668 1185 MobiDBLite consensus disorder prediction 528 561 - -
Adu01g02668 1185 Pfam Myb-like DNA-binding domain 98 133 IPR001005 -
Adu01g02668 1185 SMART sant 95 143 IPR001005 -
Adu01g02668 1185 ProSiteProfiles SANT domain profile. 94 131 IPR017884 -
Adu01g02668 1185 PANTHER LIN-9 44 655 IPR010561 GO:0006351|GO:0017053
Adu01g02668 1185 MobiDBLite consensus disorder prediction 1 22 - -
Adu01g02668 1185 MobiDBLite consensus disorder prediction 526 657 - -
Adu01g02668 1185 MobiDBLite consensus disorder prediction 168 186 - -
Adu01g02668 1185 PANTHER PROTEIN ALWAYS EARLY 1-RELATED 659 1185 IPR028306 -
Adu01g02668 1185 MobiDBLite consensus disorder prediction 326 359 - -
Adu01g02668 1185 Gene3D - 38 151 - -
Adu01g02668 1185 MobiDBLite consensus disorder prediction 636 657 - -
Adu01g02668 1185 CDD SANT 99 133 IPR001005 -
Adu01g02668 1185 Pfam DIRP 659 748 IPR033471 -
Adu01g02668 1185 PANTHER LIN-9 659 1185 IPR010561 GO:0006351|GO:0017053
Adu01g02668 1185 MobiDBLite consensus disorder prediction 288 304 - -
Adu01g02668 1185 MobiDBLite consensus disorder prediction 599 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02668 Adu-Chr1 96075758 96088856 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu01g02668 DIRP 5.8e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02668 - - adu:107464346 2156.33