Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02662 ATGACCACAAAGAGTCCCGGCTTCCTGCTTCGAAGCCTTAACCATATAGTATCCTTCTACGAATTGGTAAGGAGGTTCTCTCCCTCTGATCTTAAATCCGCTGCTTATCTAACTAGATGCCAATCCCTTTCTGATGTTCGTGTGGCTCAAAATGTGAAAATGCTGCTTGATGAAGGGTTGACCAATGCCAACATTCACCATTTGCTTAGAACTAGGCCTTCTTTGCTGTCCTCTGCTGATTTGAAGAAAACAGTTGAAGAAGTGAAGCAATTGGGGTTTGATCCTTCACAGTCTTATTTCAGTGTAGTGTTGCTGACCAAAAGGGTCATAACTAAGTCCCAGTGGGATGCTAAAGTTGATGTCCTTAAAAAATGGGGCTGGTCCGAACAAGATTTTTCGGAGGCCTATAGGAGGCACCCTCAATTCATGCTACGTTCCAAGGACAAACTCAATGCAGTGATGAGCTTTTGGATCAGTAATCTCGGCTGGGATTCTTCGGCGCTTCGCATTAGACCGGTGCTTTTTGGATACAGTTTGGAGAAGAGGCTTATTCCTAGAGCTAAGGTTATCAAATATCTTCTCTCCAATGGTTTGATGAAGAAGAATGCTAGCATAATCACACCATTGTATTTGACCGAGGAGCTGTTCCTCAAGAAGTGTGTCACATGTTTTGAGGAGAAAGATAGGGCCCTGTCGGAGTTACTCTTCTCGTCTTTCTTTATCTTCTTCCTTCATATCAAGGTTTGCTCTTTCTATTTAATACCAAATGGAATTTCATTGAGCAAATGCCCTCACCATTTGTTCTTTGCAGGTTTTGTTTCAAATTCACAGCTTGCCATCTTCATCTTCATGTCGACGAGTGAGTGGAGGATCATCCACCTGGAGCAGGGATGGGATTTCATGCAGAAGGGCATCACCAAGCTCAAGATAATTCTAGAAGAAGGCTTGCCTGAACCTCACTTCAGCTCCGAGGACTACATGATGCTTTACACAACCATCTATATCATGTGCACCCAAAGGCCTCCTCATGACTATTCCCAACAACTCTATGACAAGTACAAGGAGGTATTTGAAGAGTACATCCAATCAACGGTATTACCATCTTTGAGAGAGAAGCATGATGAATTTATGTTGATAGAACTTGTAAAGAGGTGGGCAAACCATAAAATTATGGTTAGGTGGCTTTCTCGTTTCTTTCATTTTTTGGATTGCCACTTTATTGCCCGGAGGTCACTCCCACGCCTTAATGAAGTTGGCTTAACTTGCTTCCGTGATTTGGTTTACAAGGAGCTAAATGGGAAAGTTAGAGATGCAGTTATTTCTATTGTAGGAGAGCAGATTGATCGGACTTTATTAAAGAATGTATTATACGTATTTGTTGAAATTGGGATGGGGAAAATGGATCACTATGAGAATGATTTTGAATCTGCAATGCTTAAAGACACCTCTGCTTATTACTCTCAAAAGGCTTCTAATTGGATCCTAGAAGATTCTTGTCCTGATTACATGCTCAAGGCTGAGGAGTGCTTAAAACGGGAGAAAGATAGAGTTGCTCAGTATTTGCACTTCAGTAGCGAGCCAAAGTTGTTAGAGAAAGTTCAACATGAGCTGCTATCCATGTACGCAAACCAACTCCTCCAGAAAGAGCACTCTGGATGTCATGCTTTGCTTAGAGATGGCAAGGTTGAAGATCTGTCACGGATGTTCAGGCTATTTTCTAAAGTACCTGAAGGCTTAGATGCTGTTTCCAGTATATTTAAGCAGGATTTTGTCCGGAAAGTGATTGAGCTGCATGACAAGTACCTGTCATATGTAAATGACTGTTTCCAGAATCATACTCTCTTCCACAGGGCTCTGATGGAGTCTTTTGAGGTCTTTCACAATAAAGGTGTTGGTGGGAGCTGGAGCGCTGAACTGCTTGCCACATTCTCTGATGACAACATTCTTAGAGCTAGTAGGTCTTGTTTAAAGATTGTGAAGGAAGTGGAAGTGAACCAATTAGGGTATTGTTCTTTGAGGGATGCCAAAGCCAACTCTGCCGAGACTGCCAACGCCGAGCTCACCACGGAGGCCAAACTGGAATCAGTGAAGGCGGATAACCAGAAACTGAGGGATCTGGTCAAGTTGGCCAACCAGGAGGAGGCCTTGGCAGATAAGAGCAAGGCTGGAGTTGGAGGTCAAGACGCTCAGGGAGCAGAAACTTAA 2205 0.4317 MTTKSPGFLLRSLNHIVSFYELVRRFSPSDLKSAAYLTRCQSLSDVRVAQNVKMLLDEGLTNANIHHLLRTRPSLLSSADLKKTVEEVKQLGFDPSQSYFSVVLLTKRVITKSQWDAKVDVLKKWGWSEQDFSEAYRRHPQFMLRSKDKLNAVMSFWISNLGWDSSALRIRPVLFGYSLEKRLIPRAKVIKYLLSNGLMKKNASIITPLYLTEELFLKKCVTCFEEKDRALSELLFSSFFIFFLHIKVCSFYLIPNGISLSKCPHHLFFAGFVSNSQLAIFIFMSTSEWRIIHLEQGWDFMQKGITKLKIILEEGLPEPHFSSEDYMMLYTTIYIMCTQRPPHDYSQQLYDKYKEVFEEYIQSTVLPSLREKHDEFMLIELVKRWANHKIMVRWLSRFFHFLDCHFIARRSLPRLNEVGLTCFRDLVYKELNGKVRDAVISIVGEQIDRTLLKNVLYVFVEIGMGKMDHYENDFESAMLKDTSAYYSQKASNWILEDSCPDYMLKAEECLKREKDRVAQYLHFSSEPKLLEKVQHELLSMYANQLLQKEHSGCHALLRDGKVEDLSRMFRLFSKVPEGLDAVSSIFKQDFVRKVIELHDKYLSYVNDCFQNHTLFHRALMESFEVFHNKGVGGSWSAELLATFSDDNILRASRSCLKIVKEVEVNQLGYCSLRDAKANSAETANAELTTEAKLESVKADNQKLRDLVKLANQEEALADKSKAGVGGQDAQGAET 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02662 734 Pfam Cullin family 315 652 IPR001373 GO:0006511|GO:0031625
Adu01g02662 734 PANTHER CULLIN 3B 588 654 - -
Adu01g02662 734 PANTHER CULLIN 3B 285 588 - -
Adu01g02662 734 SMART mt_12 133 164 IPR003690 GO:0003690|GO:0006355
Adu01g02662 734 SMART mt_12 66 94 IPR003690 GO:0003690|GO:0006355
Adu01g02662 734 SMART mt_12 165 199 IPR003690 GO:0003690|GO:0006355
Adu01g02662 734 Coils Coil 693 713 - -
Adu01g02662 734 Gene3D Cullin Repeats 589 633 - -
Adu01g02662 734 Gene3D Transcription termination factor 3, mitochondrial 1 227 IPR038538 -
Adu01g02662 734 Gene3D - 545 588 - -
Adu01g02662 734 Gene3D Cullin Repeats 291 425 - -
Adu01g02662 734 SUPERFAMILY Cullin repeat-like 294 630 IPR016159 -
Adu01g02662 734 PANTHER CULLIN 588 654 IPR045093 -
Adu01g02662 734 PANTHER CULLIN 285 588 IPR045093 -
Adu01g02662 734 Gene3D Cullin Repeats 426 543 - -
Adu01g02662 734 Pfam mTERF 41 216 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02662 Adu-Chr1 95979993 95986650 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Adu01g02662 Cullin 1.3e-62 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02662 K03347 - adu:107464281 644.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g02662 01 95979993 95986650 Adu01g02662 01 95979993 95986650 ECH
Adu01g02662 01 95979993 95986650 Adu04g01024 04 18433458 18435631 PCT