Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02633 ATGGCTCCACCTCTCACACTCAAGATCATCgagctcagaaccgaggaggagagagaggagacgttggaggagaggaagaccgtcgcgtcgccgttccttcgtagccgccgcagctggttcgccgtGAAAGAAGCCCGTTGCTGTTTCGACACCGTCATTGGAGCTGCCGTTGCGTCACTGTTGCTGGTGGAGGAGGATGAAGTCTCGTGTACATTTCTAGCTGCCGGGAAAGTCGACGTCGCTGCCGGAACCACCACCGGTGCTGCCGCTGCTTGGTCCAGTAATTACTCCTTGAGTACGATCATTGAAGTATATCAGCAACTATGTGATGCATCAAACACTGTCCATTTACTATTAATCTATTACCTTATGAAGTCTTCTTTGGCTCCTAGCAAAATCATGGATGTCTTCATAAAAGCTGCTGAATATATGAAAATTCCAGTTCGAGGGACTGATGACGAACCTCTTCAAAAGCTCTTTATGTTAGTGAGGAGTAAGTTGAACCTTGACCTCAAGAACATTAAGGTTGAGGTCGCTATTATTTTCTGCTGCAAACAAATGGCTGCGAGGAAGGATTTCGTCGGAGATATCAATCCAACCAAGCTTGCCTGGTCTTTGGTTGTGGGGGTTGCTCGATTGTATGAGTTTCCAAGTCAGTGGAACAAGAATGAGGTGTTTAGCTTGGAGTTGGTTTTACAAGATGAGAAGGGTGATAGAATTCATGCAACCGTTTGTAAGCCTGGGTTGGAGTTGTTCAAAAATAGGATAAAGGAGCATTGTGTTTATAGTATGCAAAATTTTATTGTCAAGCTTAACAATGGAAAGGTTAGGACAACTCCTCACAAGTACAAGCTTAACTTTTATACAAAGACTGTGGTGGCAGCCCTACCTATTGAGACTTTTGCTTTTAACCCATTCAAATTCCGTCCGTTTCATGAACTTGATGAAAATGGTCCAACCGACGGAAATTTATTATTTGATTACATAGGAGAGGTTGTTGGAAAGGAGGAGGTCAGAGGGCTGATTACGCGCACTGGTGATGAAACGAAGCTTATTACACTTCAGTTGGAAGATCTAGAAAAGCACAAAATTAAATGTACACTGTTTGGGGAATTGGTCGATCAAGTTCTTCCACATCTCGAGCGAGATGATGGGGAGCCTTTCATAATGGTGGTTCAGCTCTTTAAGTCCAACATATACTTGAATTCTGTCAATATTCAAAGTATCTACTATGTGTCCACATGTTACTTCAATCCAAACATTCCTGAGGTTATTGACTTCAAGAAAAGCTTGGCAACAGATTTTGTTCCCTGTTCACAACGAATTAGTCAGCTGGAAGCTCAACCTCAATACTCAGTTAGAGATGAGATCAGTGCCGGCATTGTACCAGTGCGCACTATAGAAGAGGTTCTTAATATCACTGAGGAAACGTCATGTTGGATTGTTGGGACCATTGTTTCTCTAGAAGTTGGTAAAGATGATTGGTCCTATATGTCGTGTAAGACATGTCCTAAGAAGGTTGTGCAAAGCAAAGATAGGTATTGGTGTGATAATTGTAGGCGTGTAGGCTTCAAGGTTATGCTAAGGTATAGGCTCCAACTAATTGTGACTGATGGAAGTGGTTGTCTGAACCTCATTGTGTGGAACAAAGAAGCAGAGCAAATGATAGGAAAGGCTGCTGAGAAAGTTAAGGAATTATCTAAATGCGATAAAGGAGATTCATACCCTAAATACCTAGAGAATATGATTGACAAAAGGTTCTTATTCAAGCTTAACATCACATACAAGAATATCAATTCCGTGGAAGGGGTGTACAGCGTCACAAAACTTTCGGATGACGAGTCCCTCATGTCCAGTTATGGTGTGCCCAATTCTTCTTCTGATGCTTCTATGCTACCTAATATCCCTATAGCCGAAACAGACGAAGATAGCAATGGACATGCTGCAGTTTCCCTGTCTAAGGATTCTGCCGTTGAGAGCAACTGTGATAGCTCCTGTCAAACTCCAGCCAAGAGAACCTCTTCTGATGCAGTTGATGACTCCCCAGCAACAGCAGCCCTATCTCCAGATGTTCAGGCATCCGCTAACAAAACATTTAAGAGGAATTGCGGAAGAAAAAAGATTGATTGA 2130 0.4028 MAPPLTLKIIELRTEEEREETLEERKTVASPFLRSRRSWFAVKEARCCFDTVIGAAVASLLLVEEDEVSCTFLAAGKVDVAAGTTTGAAAAWSSNYSLSTIIEVYQQLCDASNTVHLLLIYYLMKSSLAPSKIMDVFIKAAEYMKIPVRGTDDEPLQKLFMLVRSKLNLDLKNIKVEVAIIFCCKQMAARKDFVGDINPTKLAWSLVVGVARLYEFPSQWNKNEVFSLELVLQDEKGDRIHATVCKPGLELFKNRIKEHCVYSMQNFIVKLNNGKVRTTPHKYKLNFYTKTVVAALPIETFAFNPFKFRPFHELDENGPTDGNLLFDYIGEVVGKEEVRGLITRTGDETKLITLQLEDLEKHKIKCTLFGELVDQVLPHLERDDGEPFIMVVQLFKSNIYLNSVNIQSIYYVSTCYFNPNIPEVIDFKKSLATDFVPCSQRISQLEAQPQYSVRDEISAGIVPVRTIEEVLNITEETSCWIVGTIVSLEVGKDDWSYMSCKTCPKKVVQSKDRYWCDNCRRVGFKVMLRYRLQLIVTDGSGCLNLIVWNKEAEQMIGKAAEKVKELSKCDKGDSYPKYLENMIDKRFLFKLNITYKNINSVEGVYSVTKLSDDESLMSSYGVPNSSSDASMLPNIPIAETDEDSNGHAAVSLSKDSAVESNCDSSCQTPAKRTSSDAVDDSPATAALSPDVQASANKTFKRNCGRKKID 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02633 709 PANTHER REPLICATION FACTOR A 1, RFA1 212 627 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Adu01g02633 709 SUPERFAMILY Nucleic acid-binding proteins 194 296 IPR012340 -
Adu01g02633 709 Gene3D - 193 295 IPR012340 -
Adu01g02633 709 CDD RPA1_DBD_B_like 327 431 - -
Adu01g02633 709 Pfam Domain of unknown function DUF223 229 295 IPR003871 -
Adu01g02633 709 Gene3D - 456 618 IPR012340 -
Adu01g02633 709 MobiDBLite consensus disorder prediction 661 691 - -
Adu01g02633 709 CDD RPA1_DBD_C 481 599 IPR013955 -
Adu01g02633 709 Pfam Replication factor-A C terminal domain 490 599 IPR013955 -
Adu01g02633 709 Gene3D - 302 435 IPR012340 -
Adu01g02633 709 PANTHER BNAC07G49340D PROTEIN 212 627 - -
Adu01g02633 709 SUPERFAMILY Nucleic acid-binding proteins 306 437 IPR012340 -
Adu01g02633 709 SUPERFAMILY Nucleic acid-binding proteins 463 610 IPR012340 -
Adu01g02633 709 CDD RPA1_DBD_A_like 205 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02633 Adu-Chr1 95615937 95627261 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02633 197 600 Core DNA Replication Machinery Family AT5G08020 25.296 1.48e-18 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02633 - - adu:107463979 1059.28