Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02623 ATGGCGGGTGATCATTTCAACACCATGGACGATAAGAAGAGGAAGAAGAGGATCGCCTTGATTAGCGTCTCTTCCATTCTCCTCGTGGCCATGGTTGCTTGCGTTGCAGTGGGAATTGACAAGAGCGCTATGGAAGAAGAAGAAACCAGCAGCACCAACACAAACACAATTGTAAAGAACCAGAAGAACGTGCATGTGATTTGCGAATCAGCGGAGTTCAAAGACACGTGCGAGAAGAGCCTCGAGAAGGCCACCGCCAACGGCACCACCGACACGAAACAACTCATCATTGCTGCCTTCAACGCCACCGCGGAGGAAATTGAGAATCAGATCAACGACTCAAGCCTCGTCCAAAAGTTGGTGACCGACGACAGGAGCAAACAGGCGTTGGATATTTGCAAGGAGGTTCTTGGTTACGCCATTGACGATATCCACAGATCTGTTCACATGATGGAGAAGTTCGAGCTGAGAAGGATCGGTCAGTACGCTTATGACCTCAAGATTTGGATCGCCGGTACACTCGCTCACCAGCAAACTTGCTTGGAAGCCTTCGAGAACGTTCCGACCGAAGCTGGCAAGGAGATGGCTAAGGTTTTGAACACCTCTCTCCAGCTAAGCAGCAACGCCTTGGATATCATCAATGGCGCCAGCAAGATCTACAAGAGCTTCAACTTGGATGCCTTCTTCGGGGATAGTGCCGCCGCCCCATCCCCAGTCCCCGCGGGCAGGAGGCTTCTGTCTGACGTGGATGAGGGTTTGCCTTCGTGGATCGAGCAAGGCCGAAGGAGTCTTCTGGAAGACCCCACTCGTCTGAAACCCGATTGTGTTGTGGCTCAGGACGGCAGCGGAAACTTCAAGACTCTCACGGAGGCCCTCCAGACTGTTCCTAAGAACAACAGGAAGCGTTTCGTCATCTACGTCAAAGCAGGCATCTATAAGGAGTATGTTAACTTGCAGAAGTCCATGTCCCACGTCACCATTATCGGAGATGGCCCCACAAAGACCAGATTCTCCGGCAGCAAGAATTATGTTGATGGTCTCCAGACTTACTACACCTCAACTTTCAGTGTAAATGCCGCTAACTTCATGGCGGTAAATGTTGGGTTTGAGAACACAGCAGGAGCGGAGAAGCACCAAGCGGTGGCACTCCGCGTGACAGCAGATCAAGCAGTGTTCTACAACTGCCACATGGATGGATACCAAGACACGCTATACGTGCAATCACAGAGGCAGTACTACCGCGACTGCACGGTGACGGGCACCATTGACTTCGTGTTTGGTGACGCAGCGGGAGTGTTCCAAAACTGCACCTTCATTGTGAGGAAGCCCTTGGAAACCCAACAATGCATGGTCACTGCTGGTGGAAGGACCAAGATTGATAGCCCAACCGCCCTGGTGTTCCAGGACTGCCGCTTCACGGGCACACCAGAGTTGAAGAGCTTGCCCCGCAAGGTGTCGTACCTTGGAAGGCCATGGAGACTGTTCTCCAAGGTTGTGATAATGGACTCTGATATTGATGATATCTTCAGTCCAGAAGGGTACATGCCGTGGATGGGAACGGCATTCAGGGACACATGCACGTATCTTGAATACAACAACAGGGGACCTGGTGCTGTTACAAAAGGTAGAGTCACATGGCCTGGTGTTAGGGTCGTCACCTCTCTCGAGGCTGATCTATACTACCCTGGAAGGTTCTATGAGATCTCTAACCATACTGAGCGTGATGCTTGGATCGTTGATTCTGGGGTCCCTTACAATCTCGGCCCAAACAGCCCCTTCAAGCTCCCATCCTTATCATTCTCACTCCCATCCATAACTTTCCCTAAGTTGGTTTAA 1836 0.5142 MAGDHFNTMDDKKRKKRIALISVSSILLVAMVACVAVGIDKSAMEEEETSSTNTNTIVKNQKNVHVICESAEFKDTCEKSLEKATANGTTDTKQLIIAAFNATAEEIENQINDSSLVQKLVTDDRSKQALDICKEVLGYAIDDIHRSVHMMEKFELRRIGQYAYDLKIWIAGTLAHQQTCLEAFENVPTEAGKEMAKVLNTSLQLSSNALDIINGASKIYKSFNLDAFFGDSAAAPSPVPAGRRLLSDVDEGLPSWIEQGRRSLLEDPTRLKPDCVVAQDGSGNFKTLTEALQTVPKNNRKRFVIYVKAGIYKEYVNLQKSMSHVTIIGDGPTKTRFSGSKNYVDGLQTYYTSTFSVNAANFMAVNVGFENTAGAEKHQAVALRVTADQAVFYNCHMDGYQDTLYVQSQRQYYRDCTVTGTIDFVFGDAAGVFQNCTFIVRKPLETQQCMVTAGGRTKIDSPTALVFQDCRFTGTPELKSLPRKVSYLGRPWRLFSKVVIMDSDIDDIFSPEGYMPWMGTAFRDTCTYLEYNNRGPGAVTKGRVTWPGVRVVTSLEADLYYPGRFYEISNHTERDAWIVDSGVPYNLGPNSPFKLPSLSFSLPSITFPKLV 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02623 611 TIGRFAM PME_inhib: pectinesterase inhibitor domain 52 215 IPR006501 GO:0004857
Adu01g02623 611 ProSitePatterns Pectinesterase signature 2. 418 427 IPR033131 -
Adu01g02623 611 Pfam Plant invertase/pectin methylesterase inhibitor 64 212 IPR006501 GO:0004857
Adu01g02623 611 PANTHER PECTINESTERASE 10 592 - -
Adu01g02623 611 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 62 214 IPR035513 -
Adu01g02623 611 PANTHER PECTINESTERASE 10 592 - -
Adu01g02623 611 Gene3D - 271 589 IPR012334 -
Adu01g02623 611 ProSitePatterns Pectinesterase signature 1. 299 318 IPR018040 -
Adu01g02623 611 Gene3D Invertase/pectin methylesterase inhibitor family protein 60 216 IPR035513 -
Adu01g02623 611 CDD PMEI-like_3 67 218 - -
Adu01g02623 611 SUPERFAMILY Pectin lyase-like 272 558 IPR011050 -
Adu01g02623 611 SMART PMEI_2 59 212 IPR006501 GO:0004857
Adu01g02623 611 Pfam Pectinesterase 274 565 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02623 Adu-Chr1 95489033 95491567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02623 10 606 Carbohydrate Esterase AT3G05610 41.914 1.19e-174 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02623 K01051 - gmx:100800194 788.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g02623 01 95489033 95491567 Adu04g00962 04 16372739 16375106 PCT