Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02617 ATGGAATCGCGAATTGCCGGTGGCAGCAGCAGCAGCCACCAGTACCACCAAATTCAGCCGGAGGCTTCGACGTCGTCGTTCTGGCCACCGCCGGAGCCTAGTCGGATCTTCGATGAGTTGCCGGAAGCCACCATTATATCCGTGTCTCGGCCAGAGGCCGCCGACATTACCCCCGCTCTCCTCTCTTACACCATTCTTTTTCGCTACAGACAGTTCAAGTGGCAGCTGGTGAAGAAAGCTTCCCAAGTGTTTTATTTACATTTTATGTTAAAGAAGCGCGCCTTTATTGAGGAAATTCATGAGAAGCAAGAGCATGTTAAAGACTGGCTTCAAAATCTAGGAATAGGAGACCTTGCAGCTATGGTGCACATTGATGATGAAGCTGACGATGAAGTCATGCCTTTAAATAATCATCATGATGAAAGTGTTAAAGAAAGAGATGTTCCATCTAGTGCTGCTCTACCAATTCTGCGGCCAGCTTTAGGAACACAAGAGACTACAGCAGACAGGGCAAAGATTGCGATGCAGGGGTATCTCAATCACTTTTTGGGAAATATAACTATTGTTAACTCAAGAGAGGTTTGCAAGTTTCTGGGGGTATCAAAGTTATCCTTTTTACCTGAATATGGTTCCAAGCTACATGAAGATTACGTGATGGTGATGCATCTGCCAAAATTTTCAAAGGATGATAATTCCAGAAAGTGTTGTTTGTCTGATTGTTTTCGTTGTTGTAATGATAACTGGCAGAAGGTTTGGGCAGTACTGAAACCTGGATTCTTGGCACTGCTAGCAGATCCTTTTGATGTACAACCTTTGGACATTATTGCTTTTGATGTACTACCTTCCTCGGATGGGAATGTGGATCATCATCAATCACTGGCACAAGAAATGAAGGATCGAAATCCCTTGCGCCATTCATTTAAGGTAACTTGTGGAAACCGGTGTATTAGAGTTAGAGTAAAAAGTAGTGCTAAAGTTAAAGATTGGGTCACTGCAATTAATGATGCTGGACTCAAGCCCCCTGAAGGATGGTGTCATCCCCACCGCTATGGTTCTTATGCTCCTCCAAGAGGCTTAATCAAAGATGGAAGTCAGGCTCAATGGTTTGTAGATGGTCGTGCCGCATTTGAGGCAATTGCTTCTTCAATCAAGGATGCAAAATCAGAGATATTTATTTGTGGCTGGTGGTTGTGCCCAGAACTGTATCTAAAGCGCCCTTTTCATGCTCATGCTTCATCAAGGCTTGATAATTTGCTGGAAGCAAGAGCTAAGCAAGGGGTCCAGATTTTCGTTCTTATCTACAAAGAGGTAGCCCTTGCTTTGAAAATCAATAGTTCTTATAGCAGGAGAAAGCTTCTTAGCATTCACGAGAATGTGAGGGTATTACGCTATCCTGACCACTTTTCTACTGGTGTTTACCTGTGGTCGCATCATGAGAAACTTGTGATTGTTGACCACCAGATTTGCTTTATTGGAGGACTGGATTTGTGCTTTGGTCGTTATGACACCCCTGAACATAAAGTTGGGGATCTCCCTCCTATTATCTGGCCAGGAAAGGACTATTATAATCCAAGGGAATCCGAACCAAATTCATGGGAAGATATGATGAAAGATGAATTGGACCGTGGAAAATACCCGCGTATGCCTTGGCATGATGTTCATTGTGCACTTTGGGGGCCACCTTGTCGTGACATAGCGAGGCACTTTGTTCAGAGATGGAATTTTGCCAAGAGGAACAAAGCTCCAAATGAGCAAGCGATACCATTACTTATGCCTCGGCATCATATGGTTATTCCACATTACTTGGGAAAGGACACAGAGGTGAAGATTGAATACAGGAATAATGACAACAACAGAACCATGATGAGGGAAGACTCCTTTAGCTCAGCAACTGATGATATTCCTTTACTATTGCCTCGGGAGTCTGGTGGGCTCAATACTTCTGAAGAAGACCCCAGAAGCGGGTCAAGCTCATTTTCATATCTGCGTGACCAGACTGCTAGTAGGCTCAGCAGCGGTCTTTCTTTCTCTTTATGGAAGACCAGAGTTGAACCACTTAGTTCTGATACACCAATGAAGGGTTTTGTAGACAATCTTGATGGTGTGCAAGTGCGTCATCAAAGGAAAATGTCTCTGGATAGAGTATCTCTTGGTGATGTCCAGAATTCAGATCAAGAGTGGTGGAAAACACCAGGACCTGGTGAGCATGGAGGTTTTGCAGAAGACTCTGGACAAGTTGGCCCTCGTGTTTCGTGTCGTTGTCAGGTTATTAGGAGTGTCACTCAATGGTCAGCTGGAACAAGCCAAACCGAAGAAAGCATCCACAAGGCATATTGCTCTCTAATTGAGAAGGCAGAATATTTCATCTACATTGAGAATCAATTTTTTATCTCAGGTCTTTCACGGGATGATGTAATACGAAATCGTGTATCAGAAGCTTTATATCAACGGATTAGGCGAGCTTATGATGATAAGAAAACTTTTAGGGTTATAATTGTCATACCTCTCCTTCCTGGCTTCCAGGGGGGCCTGGACGACAGTGGTGCGGCCTCTGTGAGAGCCATAATGCACTGGCAGTATAGAACTATCTGCCGAGGACAGAATTCTATATTACATAATTTGTATGAACTTCTTGGTTCAAAAATGCATGACTATATCTCTTTCTTCGGCCTCAGGGCATATGGTAGACTTTGTGATAGCGTTCCCTTGGTAACCAGCCAGATCTATGTTCACAGCAAAATCATGATTATTGATGATTGTACATGTTTGATTGGATCTGCTAATATCAATGATAGGAGTTTACTTGGCTCCAGAGATTCTGAGATTGGTGTAGTTATAGAAGACAGAGAACTGATTGATTCCTATATGGATGGAAAGCCTTGGAAGGCAGGAAAATTCTCCTTGACTCTCCGATTGTCACTATGGTCTGAGCATTTAGGTCTTGGAGCAGGAGAGGCCAATCAAATAATGGATCCAGTTGTTGACTCTACCTACAATGACATTTGGTTGGCAAGAGCAAAGGAAAATACTAAAATTTACCAGGATGTCTTTTCTTGTGTTCCTAATGATGTGATACACAACAGATATGCTTTCCGACAAAGCGTTGCTTTTTGGAAAGATAAGATAGGTCACAGTACTATTGATCTAGGGATAGCTCCAAAAAAGTTAGAATATCATCATGACGGAGTTACTGAGAGCATTGATCCCATGGAGAGGTTAGCGTCAGTGAAAGGTCACCTTGTTAGTTTCCCCCTGGAGTTCATGAGCTTAGAAAATCTAAGACCTGCTTTCAATGAAGGCGAGTTCTATGCTGCCCAAGTTCTTGCAGTGGTCGTCATGGTTCTTTTCCAATCGTTTGTGAATGAGTTGGCACGAAGTGTGTCCATCAAGAAAGAGAAGAAGTGTCAGAAAGATGATGATGGAAGAAGAGCTGTGAAAGAAATGGCAAAGGCAGCAAAGAAGAATGGTTTGTTATTGAAATCATGTGGAGTTGTAAAGTCCACAAAGGCCAACAGCTTTGCTTCTGTGTTCACAAATAAGGGCCAGAAAGGAGTCAATCAAGATCGTGTCCTTGTTTGGGAGGAATTTGGTTGCCAAGGGGACATGATGTTATGTGGAATTTTTGATGGACATGGCCTTTGGGGACACTTAGTAGCCAAGAGGGTGAGGAAACTAGTACCAGCTTTTCTGCTATGCAATTGGCAAAAAAGTGTGGCTGCAACATCATCACTTCACTTGGATTTTAAGATGGAATCAGATGAATATATTCATGGATTTGATTTGTGGAAGCAATCCTACTTAAAGTCTTATGCTGCCATTGATCAAGATCTAAAGCAGCACACTGGGATTGATTCCTTTCGAAGTGGTACTACAGCTTTGACAATTATCAAACAGGGAAATTATCTGATTACAGCAAATCTAGGTGATTCTAGAGCTGTGTTGGCAACAACTTCAGAGGATGGAAAATTGATTCCAATTCAGCTAACAACAGACTTGAAACCAAATTTACCAGGTGAGGATCTCTCTTGA 4029 0.4274 MESRIAGGSSSSHQYHQIQPEASTSSFWPPPEPSRIFDELPEATIISVSRPEAADITPALLSYTILFRYRQFKWQLVKKASQVFYLHFMLKKRAFIEEIHEKQEHVKDWLQNLGIGDLAAMVHIDDEADDEVMPLNNHHDESVKERDVPSSAALPILRPALGTQETTADRAKIAMQGYLNHFLGNITIVNSREVCKFLGVSKLSFLPEYGSKLHEDYVMVMHLPKFSKDDNSRKCCLSDCFRCCNDNWQKVWAVLKPGFLALLADPFDVQPLDIIAFDVLPSSDGNVDHHQSLAQEMKDRNPLRHSFKVTCGNRCIRVRVKSSAKVKDWVTAINDAGLKPPEGWCHPHRYGSYAPPRGLIKDGSQAQWFVDGRAAFEAIASSIKDAKSEIFICGWWLCPELYLKRPFHAHASSRLDNLLEARAKQGVQIFVLIYKEVALALKINSSYSRRKLLSIHENVRVLRYPDHFSTGVYLWSHHEKLVIVDHQICFIGGLDLCFGRYDTPEHKVGDLPPIIWPGKDYYNPRESEPNSWEDMMKDELDRGKYPRMPWHDVHCALWGPPCRDIARHFVQRWNFAKRNKAPNEQAIPLLMPRHHMVIPHYLGKDTEVKIEYRNNDNNRTMMREDSFSSATDDIPLLLPRESGGLNTSEEDPRSGSSSFSYLRDQTASRLSSGLSFSLWKTRVEPLSSDTPMKGFVDNLDGVQVRHQRKMSLDRVSLGDVQNSDQEWWKTPGPGEHGGFAEDSGQVGPRVSCRCQVIRSVTQWSAGTSQTEESIHKAYCSLIEKAEYFIYIENQFFISGLSRDDVIRNRVSEALYQRIRRAYDDKKTFRVIIVIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGQNSILHNLYELLGSKMHDYISFFGLRAYGRLCDSVPLVTSQIYVHSKIMIIDDCTCLIGSANINDRSLLGSRDSEIGVVIEDRELIDSYMDGKPWKAGKFSLTLRLSLWSEHLGLGAGEANQIMDPVVDSTYNDIWLARAKENTKIYQDVFSCVPNDVIHNRYAFRQSVAFWKDKIGHSTIDLGIAPKKLEYHHDGVTESIDPMERLASVKGHLVSFPLEFMSLENLRPAFNEGEFYAAQVLAVVVMVLFQSFVNELARSVSIKKEKKCQKDDDGRRAVKEMAKAAKKNGLLLKSCGVVKSTKANSFASVFTNKGQKGVNQDRVLVWEEFGCQGDMMLCGIFDGHGLWGHLVAKRVRKLVPAFLLCNWQKSVAATSSLHLDFKMESDEYIHGFDLWKQSYLKSYAAIDQDLKQHTGIDSFRSGTTALTIIKQGNYLITANLGDSRAVLATTSEDGKLIPIQLTTDLKPNLPGEDLS 1342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02617 1342 PANTHER PHOSPHOLIPASE D 25 1107 IPR015679 -
Adu01g02617 1342 MobiDBLite consensus disorder prediction 1 30 - -
Adu01g02617 1342 Pfam Protein phosphatase 2C 1251 1339 IPR001932 -
Adu01g02617 1342 SUPERFAMILY PH domain-like 245 336 - -
Adu01g02617 1342 PANTHER PHOSPHOLIPASE 25 1107 - -
Adu01g02617 1342 CDD PLDc_vPLD1_2_yPLD_like_2 766 950 - -
Adu01g02617 1342 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 473 500 IPR001736 GO:0003824
Adu01g02617 1342 SUPERFAMILY Phospholipase D/nuclease 330 593 - -
Adu01g02617 1342 ProSiteProfiles PPM-type phosphatase domain profile. 1173 1342 IPR001932 -
Adu01g02617 1342 SUPERFAMILY PP2C-like 1169 1340 IPR036457 -
Adu01g02617 1342 MobiDBLite consensus disorder prediction 638 660 - -
Adu01g02617 1342 Pfam Phospholipase D Active site motif 473 500 IPR001736 GO:0003824
Adu01g02617 1342 Gene3D Endonuclease Chain A 739 966 - -
Adu01g02617 1342 CDD PH_PLD 189 336 - -
Adu01g02617 1342 CDD PP2Cc 1173 1339 IPR001932 -
Adu01g02617 1342 Pfam PLD-like domain 779 955 IPR025202 -
Adu01g02617 1342 Gene3D Endonuclease Chain A 359 599 - -
Adu01g02617 1342 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 906 933 IPR001736 GO:0003824
Adu01g02617 1342 SUPERFAMILY Phospholipase D/nuclease 726 980 - -
Adu01g02617 1342 SMART pld_4 906 933 IPR001736 GO:0003824
Adu01g02617 1342 SMART pld_4 473 500 IPR001736 GO:0003824
Adu01g02617 1342 Gene3D - 1161 1341 IPR036457 -
Adu01g02617 1342 Gene3D - 228 339 IPR011993 -
Adu01g02617 1342 SMART PH_update 212 340 IPR001849 -
Adu01g02617 1342 CDD PLDc_vPLD1_2_yPLD_like_1 366 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02617 Adu-Chr1 95420075 95432619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02617 9 986 Phospholipase D Gene Family (Wang group) AT3G16785 68.687 0.0 1324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02617 K01115 - gmx:100780514 1764.59