Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02560 ATGAGGCCTCATTCTCAGTACCCGTTTTCTCTCATCATTTTCTCCATCATCTTAATCTTAATCACAACCGCAAGAACTGAAGAACCAGCGGCCAAATCCTTCTTAATCTCATGCGGTTCTTCCACCGGTGGAACAGATTCTAACGGAAGAACATGGTTGCCAGATTCCAAGTACTTCACAACACCTTCTTCCATTGACACAAAGAATTCAACAGCAAAACAACAAGACCCTTCTCTTCCTTCACAAATACCATACATGTCTGCAAGGATCTTCACTTCTTCTTCATCAACTTTCCGGTTCCCTGTTTCACCAAACACACGCCACTATATTCGACTCCACTTTTACCCTTCCACCTACGATTCTTCTCTTGATCCAAACAACTCATACTTCTCCGTCGACGCAAATGGCTTCACTCTGCTCAACAATTTCAGTGCCTACCTCACAGCAAAAGCTCTCGCAAAAGCCTACTTCATCAAGGAGTATTCTCTCGTCCCTGCAGAATCAGGTAAACTCAGCATCACGTTCACACCGTGTTCCAAACGCCATGGATCATACGCTTTCATCAATGGCATTGAAGTTATTGCTATCCCTGACTTGTTCACTCAACCACCACCTCTGGTTTCAACTCACCAATCGATTTCTGTTGCCAACTCGTCGTTGCAAACCATGATTCGGTTGAACGTTGGTGGACAATACATTTCCCCCGACAGAGATTCCGGTGGTCTTAGCAGAACATGGTACGATGATTCACCTTACTTGTTCGCCGCAGCCTTAGGTGTCACTGCTGTGGCGGATAAGAATCTTACGATTCAATACTATTCCGATCTTCCAGAATACATTGCTCCTAAGGATGTTTACGCCACCGCAAGAACAATGGGTCCTGATAATCGAGTGAATCTGAATTATAACCTCAGTTGGGTTTTTCAGGTTGATGCAAATTTCACCTACATTGTGAGGCTCCATTTTTGTGAGCTGTTTTTCACCCGAAATAATCAAAGAAAGTTTAACATTTACGTTAACAACCAAACTGCACTGGAGGGTGCTGATGTTTATGAGTGGACTCAATCCAAAGGTGCTCCCATTTATCAAGATTTTGTCACTTTTGTTGTGGATGTACCTGGTGTTGATGATCAAGAATTGTGGGTGGAATTGCATCCCGCTGTGAAAACAAAGCCACAGTATTACGATGCAATTCTTAATGGATTGGAGATATTCAAGATCAATGACAGCAGTGGAAACTTGGCAGGGAAAAATCCTACCCCATCAAAGTTGCTTCTTGATTCCGAAGCTAAGAAAGGTAACAAAAAACATAATAATCTTGCTGCAATCATTGCTACTGGATTGGTTCTTCTTGTTGCAGCTTTATGCTTACTTGTTTACCTTAGAAAGAAGAGAAAGGGTGATAGAAATGAAACTGTTCTTGGTAATTGGTTGGCCATACATGACTCGCCGAACACAACGACTGAATGTGGCCACCATAAGAGTGGTGCTGGTTGTAGTATTTCAACACAAGGCTTATTGTGCGAAAACTTTTCAATGGAGGAGATTAAACTCGCTACAAACAACTTCGATGAATCAAAGGTCATTGGTGTTGGTGGATTTGGGAAGGTTTACAAGGGTGTCATACGAGGAGTGAAAGAAGTTGCTGTGAAAAGATCTAACCCATCTTCAAATCAAGGAATCAACGAGTTTCAGAATGAAATTTACATGCTTTCAAAGCTAAGACACAGGCATTTAGTCTCTCTAATTGGTTTTTGCCAAGAAGATGGCGAAATGATTCTAATTTATGATTACATGGCCAATGGGACTCTTCAGCAACACCTCTATAAGAGTAACAAGCCATCTTTGCCATGGAATCAAAGGCTTGAAATATGTATTGGAGCGGCGAGAGGGCTTCACTACCTTCACACCGGTGCCAAGTTCACCATAATTCACCGTGATGTAAAAACAACAAATATCCTTTTGGATGAAAGTTGGGTAGCAAAAGTCTCTGATTTTGGTTTATCCAAAACTGGTCCAAACATGAATCAAACCCATGTCAGCACAATGGTGAAAGGTAGTTTCGGTTACTTTGATCCTGAATACTTCCGCAGGCAACAACTGACAGAGAAATCTGATGTTTACTCTTTTGGGGTGGTTCTGTTTGAGGTGTTATGTGGAAGACAAGCTCTTGATCCTACGTTGCCAACAGAGCAAGTTAGTTTAGCTGATTGGGCTTTGATGAACCTAGAGAAAGGTTCACTTGAAGATATCATTGACCCTCATCTGCAAGGGAAGATTAGCATTGATTGTTTGAAAAAGTTTGCTGAGATTGCTGAGAAGTGTTTATCTGATAATGGGCTTGAACGTCCTTCAATGGGTGATGTACTGTGGACACTTGAGCTTGCACTTCAGCTGCAGAAGAATGCTGATGCGGGAAAACTTGAAGAAAAGAAAAAAGAGAAGGCAAATGATGACTCATGCATCTTGTTTGATGACTCAAATTATTTTCACAATAAAATTGCTATGACAACAGGAAGATAA 2523 0.4154 MRPHSQYPFSLIIFSIILILITTARTEEPAAKSFLISCGSSTGGTDSNGRTWLPDSKYFTTPSSIDTKNSTAKQQDPSLPSQIPYMSARIFTSSSSTFRFPVSPNTRHYIRLHFYPSTYDSSLDPNNSYFSVDANGFTLLNNFSAYLTAKALAKAYFIKEYSLVPAESGKLSITFTPCSKRHGSYAFINGIEVIAIPDLFTQPPPLVSTHQSISVANSSLQTMIRLNVGGQYISPDRDSGGLSRTWYDDSPYLFAAALGVTAVADKNLTIQYYSDLPEYIAPKDVYATARTMGPDNRVNLNYNLSWVFQVDANFTYIVRLHFCELFFTRNNQRKFNIYVNNQTALEGADVYEWTQSKGAPIYQDFVTFVVDVPGVDDQELWVELHPAVKTKPQYYDAILNGLEIFKINDSSGNLAGKNPTPSKLLLDSEAKKGNKKHNNLAAIIATGLVLLVAALCLLVYLRKKRKGDRNETVLGNWLAIHDSPNTTTECGHHKSGAGCSISTQGLLCENFSMEEIKLATNNFDESKVIGVGGFGKVYKGVIRGVKEVAVKRSNPSSNQGINEFQNEIYMLSKLRHRHLVSLIGFCQEDGEMILIYDYMANGTLQQHLYKSNKPSLPWNQRLEICIGAARGLHYLHTGAKFTIIHRDVKTTNILLDESWVAKVSDFGLSKTGPNMNQTHVSTMVKGSFGYFDPEYFRRQQLTEKSDVYSFGVVLFEVLCGRQALDPTLPTEQVSLADWALMNLEKGSLEDIIDPHLQGKISIDCLKKFAEIAEKCLSDNGLERPSMGDVLWTLELALQLQKNADAGKLEEKKKEKANDDSCILFDDSNYFHNKIAMTTGR 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02560 840 ProSitePatterns Serine/Threonine protein kinases active-site signature. 643 655 IPR008271 GO:0004672|GO:0006468
Adu01g02560 840 PANTHER OS07G0166700 PROTEIN 26 817 IPR045272 GO:0004714|GO:0006468
Adu01g02560 840 Gene3D Phosphorylase Kinase; domain 1 486 598 - -
Adu01g02560 840 Gene3D - 33 196 - -
Adu01g02560 840 Gene3D - 219 408 - -
Adu01g02560 840 PANTHER RECEPTOR-LIKE PROTEIN KINASE ANXUR2 26 817 - -
Adu01g02560 840 CDD STKc_IRAK 529 794 - -
Adu01g02560 840 Pfam Protein tyrosine and serine/threonine kinase 526 790 IPR001245 GO:0004672|GO:0006468
Adu01g02560 840 Pfam Malectin-like domain 36 407 IPR024788 -
Adu01g02560 840 Gene3D Transferase(Phosphotransferase) domain 1 599 822 - -
Adu01g02560 840 ProSiteProfiles Protein kinase domain profile. 523 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g02560 840 SUPERFAMILY Protein kinase-like (PK-like) 504 795 IPR011009 -
Adu01g02560 840 SMART serkin_6 523 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g02560 840 ProSitePatterns Protein kinases ATP-binding region signature. 529 551 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02560 Adu-Chr1 94901884 94904406 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02560 21 828 Receptor kinase-like Gene Family AT3G51550 53.735 0.0 843
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Adu01g02560 Malectin_like 7.3e-44 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02560 - - qsu:111989013 979.933