Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02556 ATGGGAACGCCACCAACGGAAGAGCTTATGAAGAAGATCGAGCAGCTAGAGGAAGGTCACGAGCATCTCAAGCAAGAGATGTCAAGGCTCAAGCTTTCTGATGCCACCAGAAGCCACCACCACCATCGCCAGAGGTCTCACTCCGTCTCTCCCCAGCGTTCTAGATTGGGTGCACCGCCGAAGAGGGGACCCGCCGATGGAGCCTCAGCTGCCGCATGGAAGAGAGGCTCTTGTTCCTTTAAGCAATCTTCACCTCTGCAGAGAGAGAGTCGCAGTGATCCCAAAAAAGAAGGTGAAGGAGGTGGTGGTGCAAAGTGTGGTCCTTCCGCCGTGAATTTTACTGATAGACAGTATCTTAATATTTTGCAGTCAATGGGACAGTCCGTTCATATATTGGATCTTACCTCTCGGATAATCTACTGGAACCGGAGTGCCGAAAATCTGTATGGTTATGCTGCGGAGGAAGCTCTTGGGCAGGATGGGATTGAGCTGATTGTTGACCCCAGGGATTTTGCCTTGGCTGAAGATATTGTGAACCGTGTCGTAATGGGAGAGAGCTGGACTGGGCAATTCCCGGTCAAGAACAAGATGGGAGAGCAGTTCTTGGCGGTGGCGACGAATACTCCTTTCTATGATGATGATGGAAGTTTAGTTGGGATTATCTGTGTCTCGAGTGATTCGCGGCTCTTCGTTGAAACGAGAGTTCCGTGCTTGGGTGCAAACAATGCTGAATCAGGTTCAGGCTCTAGGCCTCTTAGAAGTAGCATTTCAAATAAACTTGGCCTTGATACTCAGCAGCCTCTCCAAACTTCTATAGCATCCAAGTTCTCAAATTTGGCATCAAAGGTAAGTAACAAAGTTAAGTCAAGAATCCGGACTGGAGAAAATAACGGTGATCGTGAAAGCGGGAGCGGAGGAAGTCATCAATCTGAGCATAGTTTCTCAGAAGTTGGTGTTGCAGACCACAGAGAGGATGCTAATTCCAGTGGAGCTAGCACACCCAGAGGTGATGTGATGCAGTCCCCTTTTGGTATATTTTCTCATGGTGAGGAAAGATCCCAAGGAAAAACTTTGAAAGAATATGCCGATGATAGTGAAGGAAAATCTATTCACAAGATTATAACGTCTAGGGCTGAAGCATGGATTCAAAAGAAAACAATGGCATGGCCATGGAAAGCAAATGATCAAGAAGGGTCGGAGGCAAAGGATGTCCGTGTTGCTGTGCCTTTCTTGTCAAATGATCATCAAGAAACTCAGAAGCAAGAACGTCAAGGAGGTGAAAGGAATCGCCCTAGTAACAATGAGGCTTCAGGATCCTGGTCGTCGTCAATCAATATTAACAGCACAAGTAGTGCCAGCAGCTGTGGAAGTGCCGGAAGTTGTGCTGTCAATAATAAAGTGGATGTGGACACCGATTGCTTGGATTATGAAATTTTGTGGGAAGACCTGACTATTGGAGAACAAATTGGACAAGGTAGTTCCTGTGGAACTGTATATCATGCTCTGTGGTATGGATCAGATGTTGCGGTCAAGGTATTCTCAAAGCAAGAATATTCAGATGATGTGATACTTTCCTTCAGACAAGAGGTTTCTGTTATTAAAAGGCTTCGGCACCCAAATATTCTTCTCTTTATGGGGGCAGTGACTTCACCTCAACGTCTCTGCATTGTGACAGAGTTTCTCCCACGTGGAAGCTTGTGTCGCTTGTTACACAGAAACACGCCGAAACTTGACTGGAGACGACGAGTTCATATGGCCTTGGATATTGCACGAGGTGTGAATTATCTTCATCACTGCAATCCACCTATCATCCATAGAGATTTGAAGTCATCAAATCTTCTAGTTGATAAGAATTGGACTGTAAAGGTTTGTGACTTTGGTCTTTCACGTCTTAAGCATGAAACATTTCTCACTACTAAGACAGGGAGGGGCACGCCACAATGGATGGCACCAGAAGTTCTTCGTAACGAACCCTCAGATGAGAAGTCCGATGTATACAGCTTTGGAGTAATATTATGGGAACTTGCAACCGAAAAGATCCCTTGGGATAATCTCAACTCAATGCAGGTGATTGGAGCCGTGGGGTTCATGGATCAGCGACTTGAAATTCCAAAAGATGTTGATCCACGATGGGCTTCTATAATTGAGAGCTGCTGGCATCGTGATCCAGCTTCCCGTCCAACATTCCGGGAACTACTCGAGAAGCTTAGAGAGCTGCAAAGACGGTATGCCATTCAGTTCCAAGCTGCTCGATCGGCCGGAGGGGAAAGCCCCCAAAAGGAGTCCTAG 2289 0.4653 MGTPPTEELMKKIEQLEEGHEHLKQEMSRLKLSDATRSHHHHRQRSHSVSPQRSRLGAPPKRGPADGASAAAWKRGSCSFKQSSPLQRESRSDPKKEGEGGGGAKCGPSAVNFTDRQYLNILQSMGQSVHILDLTSRIIYWNRSAENLYGYAAEEALGQDGIELIVDPRDFALAEDIVNRVVMGESWTGQFPVKNKMGEQFLAVATNTPFYDDDGSLVGIICVSSDSRLFVETRVPCLGANNAESGSGSRPLRSSISNKLGLDTQQPLQTSIASKFSNLASKVSNKVKSRIRTGENNGDRESGSGGSHQSEHSFSEVGVADHREDANSSGASTPRGDVMQSPFGIFSHGEERSQGKTLKEYADDSEGKSIHKIITSRAEAWIQKKTMAWPWKANDQEGSEAKDVRVAVPFLSNDHQETQKQERQGGERNRPSNNEASGSWSSSININSTSSASSCGSAGSCAVNNKVDVDTDCLDYEILWEDLTIGEQIGQGSSCGTVYHALWYGSDVAVKVFSKQEYSDDVILSFRQEVSVIKRLRHPNILLFMGAVTSPQRLCIVTEFLPRGSLCRLLHRNTPKLDWRRRVHMALDIARGVNYLHHCNPPIIHRDLKSSNLLVDKNWTVKVCDFGLSRLKHETFLTTKTGRGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMDQRLEIPKDVDPRWASIIESCWHRDPASRPTFRELLEKLRELQRRYAIQFQAARSAGGESPQKES 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02556 762 Pfam Protein tyrosine and serine/threonine kinase 483 736 IPR001245 GO:0004672|GO:0006468
Adu01g02556 762 Gene3D Phosphorylase Kinase; domain 1 476 561 - -
Adu01g02556 762 SMART serkin_6 483 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g02556 762 SUPERFAMILY PYP-like sensor domain (PAS domain) 120 223 IPR035965 -
Adu01g02556 762 PANTHER SERINE/THREONINE-PROTEIN KINASE DDB_G0282963 ISOFORM X1-RELATED 30 760 - -
Adu01g02556 762 Gene3D Transferase(Phosphotransferase) domain 1 563 748 - -
Adu01g02556 762 CDD STKc_MAP3K-like 489 736 - -
Adu01g02556 762 PRINTS Tyrosine kinase catalytic domain signature 707 729 IPR001245 GO:0004672|GO:0006468
Adu01g02556 762 PRINTS Tyrosine kinase catalytic domain signature 644 654 IPR001245 GO:0004672|GO:0006468
Adu01g02556 762 PRINTS Tyrosine kinase catalytic domain signature 558 571 IPR001245 GO:0004672|GO:0006468
Adu01g02556 762 PRINTS Tyrosine kinase catalytic domain signature 597 615 IPR001245 GO:0004672|GO:0006468
Adu01g02556 762 PRINTS Tyrosine kinase catalytic domain signature 663 685 IPR001245 GO:0004672|GO:0006468
Adu01g02556 762 SUPERFAMILY Protein kinase-like (PK-like) 472 735 IPR011009 -
Adu01g02556 762 MobiDBLite consensus disorder prediction 321 340 - -
Adu01g02556 762 MobiDBLite consensus disorder prediction 16 109 - -
Adu01g02556 762 CDD PAS 125 226 IPR000014 -
Adu01g02556 762 ProSiteProfiles Protein kinase domain profile. 483 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g02556 762 MobiDBLite consensus disorder prediction 287 316 - -
Adu01g02556 762 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 30 760 - -
Adu01g02556 762 MobiDBLite consensus disorder prediction 409 445 - -
Adu01g02556 762 TIGRFAM sensory_box: PAS domain S-box protein 116 226 IPR000014 -
Adu01g02556 762 MobiDBLite consensus disorder prediction 16 34 - -
Adu01g02556 762 Gene3D PAS domain 126 229 - -
Adu01g02556 762 SMART pas_2 116 183 IPR000014 -
Adu01g02556 762 MobiDBLite consensus disorder prediction 298 314 - -
Adu01g02556 762 Pfam PAS fold 117 224 IPR013767 GO:0006355
Adu01g02556 762 MobiDBLite consensus disorder prediction 430 445 - -
Adu01g02556 762 MobiDBLite consensus disorder prediction 35 49 - -
Adu01g02556 762 ProSiteProfiles PAS repeat profile. 114 185 IPR000014 -
Adu01g02556 762 Coils Coil 6 33 - -
Adu01g02556 762 ProSitePatterns Serine/Threonine protein kinases active-site signature. 603 615 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02556 Adu-Chr1 94869248 94873297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02556 1 753 MAP Kinase Kinase Kinase AT3G06620 60.051 0.0 933
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Adu01g02556 PK_Tyr_Ser-Thr 1.3e-65 CL0016