Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02548 ATGCTTCAGGCATTCATGAATCTACGCGCTCTCTGTTTGAGGCCATTCGGGCTCGCTGACGACAAGGTCGACACTTCCCCCGTCGAAGTCAACGGCGGCAGCTTCAGAGGCAGCGGAAGCTTCAAAGGCGGCGCCGGCGCAAGAGAAGGCAAGGACAGCCTCCTCTGGTCTCGCGCCGTCGGAAAATATGGCTCCGGCGATTTCTCCATGGCCGTCGTCCAGGCCAATCAGGTCCTTGAAGACCAGAGCCAGATAGAGTCCGGTCCCCTTGGCACCTTTGTTGGCATCTACGACGGTCACGGAGGACCCGACGCCGCGCGATTCGTATGCGATCACCTCTTTCGCCATTTTCAAGCAATATCAGCTGAAGCAAATGGAGGCGTGATCACTGAGACCATCGAGAGGGCATTCCGCCAAACAGAAGAAGGGTATGCTGCTCTTGTGTCAGACTTGTGGAGCACTCGGCCTCAAGTCGCAAGCGCCGGGACTTGTTGTCTGGTTGGAGTGATATTTCAGCAGACACTCTTTGTGGCAAACCTTGGAGACTCCCGCGTTGTATTGGGCAAGAAAGTTGGCAACACAGGGGGCGTTGCTGCAATTCAGCTTTCTACAGAACACAATGCAAATGTTGAAGCTGTGCGGCAGGAGCTTAAAGAGTTACACCCACATGATCCCCAGATTGTTGTCCTCAAACATGGAGTGTGGAGAGTCAAAGGCATTATTCAGATTTCTAGATCTATAGGTGACGTATATATGAAAGACGCACAATTTAACCGGGAACCACTTCCTGCAAAATTCAGACTTCCTGAACCCATGCACATGCCTATCTTGAGTGCTGAACCCGCTATTATTTCTCGTCGACTGCAACCAAATGATTCTTTCATTATATTTGCATCAGATGGCTTATGGGAGCACCTGAGCAATGAAAAGGCTGTGGAAATTGTTAGCAGCAATCCACACACGTCTATAGTGTGTGGTTCATGTGATCCGGAGACCATAATGCACAGGACATAA 1014 0.5099 MLQAFMNLRALCLRPFGLADDKVDTSPVEVNGGSFRGSGSFKGGAGAREGKDSLLWSRAVGKYGSGDFSMAVVQANQVLEDQSQIESGPLGTFVGIYDGHGGPDAARFVCDHLFRHFQAISAEANGGVITETIERAFRQTEEGYAALVSDLWSTRPQVASAGTCCLVGVIFQQTLFVANLGDSRVVLGKKVGNTGGVAAIQLSTEHNANVEAVRQELKELHPHDPQIVVLKHGVWRVKGIIQISRSIGDVYMKDAQFNREPLPAKFRLPEPMHMPILSAEPAIISRRLQPNDSFIIFASDGLWEHLSNEKAVEIVSSNPHTSIVCGSCDPETIMHRT 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02548 337 ProSiteProfiles PPM-type phosphatase domain profile. 67 337 IPR001932 -
Adu01g02548 337 ProSitePatterns PPM-type phosphatase domain signature. 93 101 IPR000222 GO:0043169
Adu01g02548 337 CDD PP2Cc 68 322 IPR001932 -
Adu01g02548 337 Gene3D - 54 330 IPR036457 -
Adu01g02548 337 PANTHER ALPHABET, ISOFORM E-RELATED 4 321 - -
Adu01g02548 337 SUPERFAMILY PP2C-like 76 321 IPR036457 -
Adu01g02548 337 SMART PP2C_4 54 336 IPR001932 -
Adu01g02548 337 Pfam Protein phosphatase 2C 90 318 IPR001932 -
Adu01g02548 337 PANTHER PROTEIN PHOSPHATASE 2C 42-RELATED 4 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02548 Adu-Chr1 94811149 94814329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02548 1 319 PP2C-type Phosphatase Gene Family AT3G17090 65.831 9.89e-148 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02548 K01102 - gmx:100790813 509.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g02548 01 94811149 94814329 Adu01g02548 01 94811149 94814329 ECH
Adu01g02548 01 94811149 94814329 Adu04g00829 04 12280448 12284450 PCT