Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu01g02544 | ATGGCCTCAACAACGGTGGTGTCAAACCCAGCACCAACAAGCACGGACCGGTCACGTGACTCAAAGAGGAAGAAGAAGAAGAAACTGCAGAAAGAATATCTTCAGAGTCACTTCAAATGGAAATCGCAAGCGCAGCAACAAATTTATTCCTCCAAGCTCCACCAGGCCTTAGCGAGAGTCAACCTCGCCTCCACCTCCGTCCCCCGCCGCGGAAAGGCCGTCCGAGAAGCCGCGGACAGAGTCCTCGCCACCACAGCTAAAGGCAAAACACGGTGGAGCCGCGCCATACTCGCCAACCGCAGGCTCAAGCTCAAGTTCTCCAAACAGCACAAGAGACAGAGAGTGGCGCAGCCTGCGCTCACCCGATCCAAGAAGCCACGTGTCAGCGTTTTACGCCTCAAAGGGAAGAAGAACTTACCGGCTGTGCAGAGGAAACTCAGGTTCTTGGCGCGACTCGTTCCCGGTTGCCGGAAAGAACCTGTGCCGGTCATTCTCGAAGAGGCCATCGATTACATACCGGCGCTTGAGATGCAAGTCAGAGCCATGGCTGCTCTTCTCAACCTTCTCTCTGGCTCCGGCTCCGGCGCCGCCGCCTCAGACTCCTCTTCCGGCGCCGGCACAAGCTCGGCGCCGCCAAGCTGA | 642 | 0.5779 | MASTTVVSNPAPTSTDRSRDSKRKKKKKLQKEYLQSHFKWKSQAQQQIYSSKLHQALARVNLASTSVPRRGKAVREAADRVLATTAKGKTRWSRAILANRRLKLKFSKQHKRQRVAQPALTRSKKPRVSVLRLKGKKNLPAVQRKLRFLARLVPGCRKEPVPVILEEAIDYIPALEMQVRAMAALLNLLSGSGSGAAASDSSSGAGTSSAPPS | 213 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu01g02544 | 213 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 126 | 175 | IPR011598 | GO:0046983 | |
Adu01g02544 | 213 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 143 | 190 | IPR036638 | GO:0046983 | |
Adu01g02544 | 213 | CDD | bHLH_AtIBH1_like | 136 | 186 | IPR044549 | GO:0006355 | |
Adu01g02544 | 213 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
Adu01g02544 | 213 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - | |
Adu01g02544 | 213 | MobiDBLite | consensus disorder prediction | 192 | 213 | - | - | |
Adu01g02544 | 213 | PANTHER | MYC-TYPE, BASIC HELIX-LOOP-HELIX (BHLH) DOMAIN-CONTAINING PROTEIN-RELATED | 9 | 204 | - | - | |
Adu01g02544 | 213 | PANTHER | TRANSCRIPTION FACTOR IBH1-LIKE 1 | 9 | 204 | IPR044660 | GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu01g02544 | Adu-Chr1 | 94745331 | 94745972 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Adu01g02544 | 37 | 195 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT3G06590 | 58.857 | 1.72e-50 | 161 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu01g02544 | - | - | gmx:100803765 | 222.631 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Adu01g02544 | 01 | 94745331 | 94745972 | Adu04g00828 | 04 | 12250054 | 12250839 | PCT |