Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02541 ATGGAAGAAGGGAAGAGAGAGAAGAAGAAGAAAGAAGAAGAAGCATCCACCACCACTGCTACTACTATTACTATGGCTAATTCCGTCGCATTTTCCGATGAGATTCCGATCACAAACACAAACACAATCAACACTTCTTACCCTTTCTCAAGCATCTTTGACATGATGCCACTTCCATTACTACCCTCTTATGATCACAAAACTTCTGCCAATGGCTTCATCGACTTGCTCGCTCTCCATGACTACACTCCTTCCTTATTCGATTGCTTTCCCACAACCACCACCGCCGCCGAAGCCACGCCGCAGCAAATCAGCAGCAGCCAGCAGCAGCAGCAGGCTCTGCCGTCGCCGGCGAGCTCCAATGTCCCGGACTGTTCGGAGGTGTTGAACACTCCGGCGTCACCAAACTCGTCGTCGATTTCATCTTCGTCGAACGAAGGCGGCGCCGGCGTCGGCAGCAACAACAACAACGCGGAAGAGCATAACGGTGGGAAGGTAGTTGCTGATGATGAACATGAAGCAGAGGATGAAGAGGCCGATGGATCCAAAGAGAATCAAGACAAGACTAAGAAACAATTGAAAGCAAAGAAGAAGAATCAAAAGAAGCAAAGAGAACCTCGGTTTGCGTTTATGACAAAGAGCGAAGTGGATCATTTAGACGACGGTTACAGATGGCGTAAGTACGGACAGAAAGCAGTGAAAAATAGCCCTTATCCAAGGAGCTACTATCGTTGCACCACATCCGGGTGTGGTGTTAAGAAGCGCGTGGAGCGTTCTTCCGACGATCCAAGCATTGTTGTAACTACCTATGAAGGGCAGCACACTCACCCTTGTCCCGCTACCTCACGCGCCGCACTCGCGTTCATGCACGAACCCTCCTTCGCCACCATTGGATCTTCTTCTCCTCACTTTCTGCTTCCTCATCAACAACACTTCCAGCAACCGCCGCCACCGCCTTCGTTATATAACTCCGCTACTACTACTAATCCAACTCCACCTACTAATGCGTCGTCGTTTGGGACCTTCGTTCTTCAGGATGGAGCTTTTGCTGCAGCTTCTAGGTTGAACATGGATCAAGCTTTCTTGAGAGACCATGGTCTTCTTCAGGACATTGTTCCATCTCAGATCAGGAAGGAGGATAACATCGAATGA 1152 0.4939 MEEGKREKKKKEEEASTTTATTITMANSVAFSDEIPITNTNTINTSYPFSSIFDMMPLPLLPSYDHKTSANGFIDLLALHDYTPSLFDCFPTTTTAAEATPQQISSSQQQQQALPSPASSNVPDCSEVLNTPASPNSSSISSSSNEGGAGVGSNNNNAEEHNGGKVVADDEHEAEDEEADGSKENQDKTKKQLKAKKKNQKKQREPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTSGCGVKKRVERSSDDPSIVVTTYEGQHTHPCPATSRAALAFMHEPSFATIGSSSPHFLLPHQQHFQQPPPPPSLYNSATTTNPTPPTNASSFGTFVLQDGAFAAASRLNMDQAFLRDHGLLQDIVPSQIRKEDNIE 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02541 383 MobiDBLite consensus disorder prediction 98 205 - -
Adu01g02541 383 Pfam WRKY DNA -binding domain 220 277 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu01g02541 383 Gene3D WRKY domain 203 280 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu01g02541 383 SMART WRKY_cls 219 278 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu01g02541 383 MobiDBLite consensus disorder prediction 98 161 - -
Adu01g02541 383 SUPERFAMILY WRKY DNA-binding domain 211 279 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu01g02541 383 MobiDBLite consensus disorder prediction 307 339 - -
Adu01g02541 383 ProSiteProfiles WRKY domain profile. 214 279 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu01g02541 383 Coils Coil 183 203 - -
Adu01g02541 383 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 70 374 IPR044810 GO:0003700
Adu01g02541 383 MobiDBLite consensus disorder prediction 324 339 - -
Adu01g02541 383 PANTHER WRKY TRANSCRIPTION FACTOR 48-RELATED 70 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02541 Adu-Chr1 94660238 94661596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02541 25 379 WRKY Transcription Factor Family AT5G49520 45.263 1.31e-60 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Adu01g02541 WRKY 2.3e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02541 - - gmx:100788697 300.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g02541 01 94660238 94661596 Adu01g02541 01 94660238 94661596 ECH