Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu01g02503 | ATGAATTGTGTAATTTCATCCCCTGCATCCATGGGTCACTTCTATGTAAGCAAGAATGTGAAATTGCTTCTTGATGAGGGCTTAACTCATTCCCACATTAAGCGCTTGTTTCAATGCAGGCCTTCTATATTAGCCAGTTCTAATTTGTGGAAAACTGTGGCAGAAGTGAAGAAATTAGGGATTGATCCTTCTTTGATGAATTTCAGTGTGGCATTGATGGCTAAGAAGGCTGTGGCGAAATCCGGGTGGGATGCCAAAGTTGAAGCCTGTAAGACTTGGGGTTGGTCGGAGGAACAGTTTTCCGATGTGTTTAGGAAGCATCCGCAGATCATGCTTCGGTCCGAGAAGAAAATCATAGCAGTCATGAGCTTTTGGGTTGGTAAGCTTGGTTGGGATCCTTCGTTGCTGTGCGTGGCGCCGGTAATCTTTGGATTGAGCTTGGAAAAAAGGGTTATTCCAAGGGCTTTGGTTGTGCAGTATCTTCTCTCCAAAGGTTTGATGAAAAAGGATGCTAGCTTAGCTACACCATTTTATCTGACTGACAAGAAGTTCCTGGAAAGATATGTGACACGTTTTGAGAAGCATCATCCATCTCAGCTATCAAAGCTATTACATAGCAAAACATGTTAG | 630 | 0.4317 | MNCVISSPASMGHFYVSKNVKLLLDEGLTHSHIKRLFQCRPSILASSNLWKTVAEVKKLGIDPSLMNFSVALMAKKAVAKSGWDAKVEACKTWGWSEEQFSDVFRKHPQIMLRSEKKIIAVMSFWVGKLGWDPSLLCVAPVIFGLSLEKRVIPRALVVQYLLSKGLMKKDASLATPFYLTDKKFLERYVTRFEKHHPSQLSKLLHSKTC | 209 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu01g02503 | 209 | Pfam | mTERF | 16 | 185 | IPR003690 | GO:0003690|GO:0006355 | |
Adu01g02503 | 209 | SMART | mt_12 | 101 | 132 | IPR003690 | GO:0003690|GO:0006355 | |
Adu01g02503 | 209 | SMART | mt_12 | 34 | 62 | IPR003690 | GO:0003690|GO:0006355 | |
Adu01g02503 | 209 | SMART | mt_12 | 133 | 167 | IPR003690 | GO:0003690|GO:0006355 | |
Adu01g02503 | 209 | Gene3D | Transcription termination factor 3, mitochondrial | 11 | 196 | IPR038538 | - | |
Adu01g02503 | 209 | PANTHER | TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN | 1 | 207 | - | - | |
Adu01g02503 | 209 | PANTHER | CGI-12 PROTEIN-RELATED | 1 | 207 | IPR003690 | GO:0003690|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu01g02503 | Adu-Chr1 | 94146158 | 94146787 | Tandem |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | mTERF | Adu01g02503 | mTERF | 1.9e-16 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu01g02503 | K15032 | - | gmx:102667698 | 197.593 |