Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02503 ATGAATTGTGTAATTTCATCCCCTGCATCCATGGGTCACTTCTATGTAAGCAAGAATGTGAAATTGCTTCTTGATGAGGGCTTAACTCATTCCCACATTAAGCGCTTGTTTCAATGCAGGCCTTCTATATTAGCCAGTTCTAATTTGTGGAAAACTGTGGCAGAAGTGAAGAAATTAGGGATTGATCCTTCTTTGATGAATTTCAGTGTGGCATTGATGGCTAAGAAGGCTGTGGCGAAATCCGGGTGGGATGCCAAAGTTGAAGCCTGTAAGACTTGGGGTTGGTCGGAGGAACAGTTTTCCGATGTGTTTAGGAAGCATCCGCAGATCATGCTTCGGTCCGAGAAGAAAATCATAGCAGTCATGAGCTTTTGGGTTGGTAAGCTTGGTTGGGATCCTTCGTTGCTGTGCGTGGCGCCGGTAATCTTTGGATTGAGCTTGGAAAAAAGGGTTATTCCAAGGGCTTTGGTTGTGCAGTATCTTCTCTCCAAAGGTTTGATGAAAAAGGATGCTAGCTTAGCTACACCATTTTATCTGACTGACAAGAAGTTCCTGGAAAGATATGTGACACGTTTTGAGAAGCATCATCCATCTCAGCTATCAAAGCTATTACATAGCAAAACATGTTAG 630 0.4317 MNCVISSPASMGHFYVSKNVKLLLDEGLTHSHIKRLFQCRPSILASSNLWKTVAEVKKLGIDPSLMNFSVALMAKKAVAKSGWDAKVEACKTWGWSEEQFSDVFRKHPQIMLRSEKKIIAVMSFWVGKLGWDPSLLCVAPVIFGLSLEKRVIPRALVVQYLLSKGLMKKDASLATPFYLTDKKFLERYVTRFEKHHPSQLSKLLHSKTC 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02503 209 Pfam mTERF 16 185 IPR003690 GO:0003690|GO:0006355
Adu01g02503 209 SMART mt_12 101 132 IPR003690 GO:0003690|GO:0006355
Adu01g02503 209 SMART mt_12 34 62 IPR003690 GO:0003690|GO:0006355
Adu01g02503 209 SMART mt_12 133 167 IPR003690 GO:0003690|GO:0006355
Adu01g02503 209 Gene3D Transcription termination factor 3, mitochondrial 11 196 IPR038538 -
Adu01g02503 209 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 1 207 - -
Adu01g02503 209 PANTHER CGI-12 PROTEIN-RELATED 1 207 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02503 Adu-Chr1 94146158 94146787 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Adu01g02503 mTERF 1.9e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02503 K15032 - gmx:102667698 197.593