Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02485 ATGCAGCAAAGCAGAGGTTTATCTCTGAATATTGATGTGTCAACTACTATGGTTGTAAAGCCTGGCCCTGTACTGGACTTCCTTTGTGGGAATCAGAATGTGAAACATCCAAATCTTATTGATTGGACCAAGGCTAATAATATTGAGTACAAAATCACTGGACTCAGTGATAATCCTTGCAGGACTCAGAAGTTTTCAATGAAAGATGGGAAGGACTCGAATGGCGAACCATGGATAATTGAAATCACAGTTTACAATTACTTTAAACACCATAAGGGGATTGAATTGCCCTATTCTGCTGTTTTTCCCTGCATCAATGTTGGGAAGCCAAAGCACCCAACTTATTTTCCATTGGAGCTATGCACCTTGATCTCATTGAAGCGGTACACCAAGGCATTGACAAATTTGCAAAGGGCTCAGTTAGTTGAGAAGTCAAGGCAAAAGCCCAATGAAAGGAAAGAAGCTTTGGCTGGTTCTTTAAGAAACAGCAGATATGGTAATGAGCCTATGCTTCGCTCTTCTGGGATTACCATTGAATCTGATTTTACTCGGGTTGAAGGGTGTATTCTGCAGCCCCCAAGACTTGTAGTTGGAAATGAGGAGAGCTTCATTCCAAGGGGTGGGCGCTGGAATTTCAACAATAAGAAACTAGTTAAACCTATGAGGTTTGAGCGCTGGGCCGTTGTAAACTTCTCAGCTCGCTGTGACACGCGTTTTCTGTGTAATACCATCAAGAAGTGTGCTGAAATGAAGGGGATTCACATAAACCCTCCATATCAAGTATTCGAAGAGGATGAGAGAAAGAATTCTGAAATTTATGGACCTTGGAAAAGGAGAAGTCTTGCTGATGAAGGAGTTGCAACACAGTATATTGCACTAACAAAAATTAATGATCAGTATATTACTAATGTTCTCCTGAAAATTAATGCAAAGCTTGATGGAATGAATTCCTTTCTGTCAATGGAGTGCCGATCGGATGTGCAATCTATTGCCGCAGTTGTGAGTTCAAGGAAATGGCCTTCAATATCCTGCTATAGAGCCGCAGTTCACACTCAATCACCAAGAGTTGAGGTGATTCAGTCTTTATTTAAGCCTGTTCCTTCGAATGATGGTAACAAAGATGAAGGTATCATCAGGGAGCTAATTATGGATTTCTATGAAACATCAAAACAAAGGAAGCCTCAACAAATTATAATTTTCAGTCACACTCACCGGCGTCTCGTTGATCCTCTCCTATCATCGCCGGCGTTTCAACGTCTCGCGGCCTTCCCTGGGCTCCTCCTCGCCGGCGACAGAAGCACTTGTCGGATTGTGGACCGTCGCGAGTCGCCGTGGATCGTGGACCGTCGTAGGGTCGTCACTTGCTTCGTCGCTCGTCCCCTTATGGGGTCGGGTCCTCTTCGTCACCCAGTCGCCCTTGGTAAGTCCATGCATCATCACTTCCCTGTTCTCCCTTTCCCAGATTCCCTTCTCCCAAAAAATGGTAAGGTTGAGGTGCCTCAAAGGGTTCAACCTGATATCTTTAGAAACGAGACAGCACAAATGCCAGAGTCAAGGAATCCATTACTGGATGAAGATTTAGTTAGGAACAATGTCGGGCATGATGGAGAAAAATCGACTCATTCTAAGAGAAATGGAATCATGTTGGACACGGGTTCAGATCTTTCTACCACATTGGCTGAGGATGATGATTCCAACCTCATCCCTTCAAGGTTGCGTGACAATATTGTAGGGACTGGTGGGTCATGTTCCAAACGGAGAAGGTTGGATTGTGATCCTGTGGTCTCATCTAACCCTTCTACAACTGAGCTTCAGGATGGAGTTGATACTGATGCAAGTGTGTTGCAAAAGGAATATCCTGTAAATTCACCAAAAGAAGTCACAAAGCACACATGTCTAATTTGCAAGAGTGGTGGACAGCTACTTCATATGGAGTTGTTAATATCTAGTTTGATGGTTTCAATAAAAAAGAAAGGGAAGAAAAAACGAACAAGCTACTTTGTTGGATTTTATATGCCTTATAAATTATTAACATCAATTATAATCAATTCAAAATTAATAACAGAGGAGAAAACTGCAGGTTCTGAAGAGGATGAAGAAAAAGGAGTACCTGCTTTTTGGCTCAATGCAATCAAAAACAATGAAGTGTTAGCTGAAGAGAACTCTGTTGTTGGTGATGCTGCTGATCATGAAGCAATTGACGAGGAACTTCATCTTGAAAATCTTAAGGTTGATAAAAGCTTTTAA 2247 0.4219 MQQSRGLSLNIDVSTTMVVKPGPVLDFLCGNQNVKHPNLIDWTKANNIEYKITGLSDNPCRTQKFSMKDGKDSNGEPWIIEITVYNYFKHHKGIELPYSAVFPCINVGKPKHPTYFPLELCTLISLKRYTKALTNLQRAQLVEKSRQKPNERKEALAGSLRNSRYGNEPMLRSSGITIESDFTRVEGCILQPPRLVVGNEESFIPRGGRWNFNNKKLVKPMRFERWAVVNFSARCDTRFLCNTIKKCAEMKGIHINPPYQVFEEDERKNSEIYGPWKRRSLADEGVATQYIALTKINDQYITNVLLKINAKLDGMNSFLSMECRSDVQSIAAVVSSRKWPSISCYRAAVHTQSPRVEVIQSLFKPVPSNDGNKDEGIIRELIMDFYETSKQRKPQQIIIFSHTHRRLVDPLLSSPAFQRLAAFPGLLLAGDRSTCRIVDRRESPWIVDRRRVVTCFVARPLMGSGPLRHPVALGKSMHHHFPVLPFPDSLLPKNGKVEVPQRVQPDIFRNETAQMPESRNPLLDEDLVRNNVGHDGEKSTHSKRNGIMLDTGSDLSTTLAEDDDSNLIPSRLRDNIVGTGGSCSKRRRLDCDPVVSSNPSTTELQDGVDTDASVLQKEYPVNSPKEVTKHTCLICKSGGQLLHMELLISSLMVSIKKKGKKKRTSYFVGFYMPYKLLTSIIINSKLITEEKTAGSEEDEEKGVPAFWLNAIKNNEVLAEENSVVGDAADHEAIDEELHLENLKVDKSF 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02485 748 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 266 401 - -
Adu01g02485 748 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 2 266 - -
Adu01g02485 748 Gene3D - 319 404 IPR036397 GO:0003676
Adu01g02485 748 Pfam PAZ domain 44 141 IPR003100 GO:0005515
Adu01g02485 748 Gene3D - 189 265 - -
Adu01g02485 748 Gene3D paz domain 15 129 - -
Adu01g02485 748 SUPERFAMILY Ribonuclease H-like 185 403 IPR012337 -
Adu01g02485 748 ProSiteProfiles PAZ domain profile. 50 125 IPR003100 GO:0005515
Adu01g02485 748 PANTHER PROTEIN ARGONAUTE 6 2 266 - -
Adu01g02485 748 SUPERFAMILY PAZ domain 16 165 IPR036085 GO:0005515
Adu01g02485 748 Pfam Piwi domain 267 400 IPR003165 GO:0003676
Adu01g02485 748 Gene3D - 266 318 - -
Adu01g02485 748 CDD PAZ_argonaute_like 21 124 - -
Adu01g02485 748 PANTHER PROTEIN ARGONAUTE 6 266 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02485 Adu-Chr1 93947159 93954590 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02485 6 400 Eukaryotic Initiation Factors Gene Family AT5G43810 28.953 5.55e-46 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02485 K11593 - pop:7486850 497.278