Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02478 ATGGTTGCCGACACCATAGCCATCAACTACCACAACGACCGGATCTTACCCGAACCGGATGTCTTCATTCGCACCTCCGCCGGAACACGTATTCCTGCCCACTCCAGTATTCTGGCTTCTGTGTCGCCGGTTTTGGAGAACGTCATAGACCGCCCGCGAAAACATCGGAGCTCCGAAAGAATCATCCAGATTCACGGCGTTCCCTGCGAAGCCGTAGCCGTCTTCGTCACCTTCATCTAa 240 0.5458 MVADTIAINYHNDRILPEPDVFIRTSAGTRIPAHSSILASVSPVLENVIDRPRKHRSSERIIQIHGVPCEAVAVFVTFI 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02478 79 ProSiteProfiles BTB domain profile. 19 79 IPR000210 GO:0005515
Adu01g02478 79 SUPERFAMILY POZ domain 20 79 IPR011333 -
Adu01g02478 79 Gene3D Potassium Channel Kv1.1; Chain A 10 79 IPR011333 -
Adu01g02478 79 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 1 79 IPR044513 -
Adu01g02478 79 Pfam BTB/POZ domain 19 79 IPR000210 GO:0005515
Adu01g02478 79 PANTHER BTB/POZ AND TAZ DOMAIN PROTEIN 1 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02478 Adu-Chr1 93883984 93884329 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Adu01g02478 BTB 1.5e-05 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02478 - - adu:110280725 158.688