Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02477 ATGGCTCTGCCCACCTGCCTCACCTCCATCAGCCTGGCCCTCACCTCCTCCAGGATGACCACGATCACCACCTCCGGTACTCCCACCCTGACCACCATCACCTCTACCATAGTGGCCCCCGTAACCACCTCCACCACCTCCCTGACCTCCCGTCACCACCGTTGTACCCTCCTCCACCACCACCACCACTTCCCTGACCCCGTCGTCACCTCCATCGTCTCCGTCATCACCACCTTCATCCTCACCGCTACCCTCATCCTCTCCGCCTCTGCCTCCACGTCGGCCTCTACCTCACCACCACCTCTAGCTCCTCTACGGCCGCGACCACTCCCCCCTCGCCGTCCAACCATTCCCAAACCTTCCCACCAAACCTCATTTCCGATTCCCGTCCTCAAAAGTGGAAGCTTTGCCCCAAGGGAAAAAATGAGCCTTCTAAAGAACTGCCGAAGTTTTCTGTCAAACTTTTTCTTCATTCCAGCGGGCATGTTGCAGCGAAATTCCAATATGACCAGGTTATGGATGTTTCCGCTTTCTTCCTTATCAGAAGCAGAGAAGGTTCTAGGAGAAATATCTAATTATAAAGTTCAGTTGGAGGTGGTAAAAGCCAAAATCAAGTCTGCTAAATCAAAAGATGAGTCTGAATCTGTTAAATTTACTCAAAAGAATCTGATTAACAAGATATATACTAATTCTGCAGATGCCAAGATTCCTGCTACTCTTGAGTATCTCGGAACTTTCATTGAGGCAGGTTGCAAGTTTCTTATATTTGCGCACTCTGCTAAATCAAAAGATGAGTCTGAATCTGTTAAATTTACTCAAAAGAATCTGATTAACAAGGCAGGTTGCAAGTTTCTTATATTTGCGCACCATCAGCCAATGATAGATGCGATACATGAGTGCCTTCTTAAGAAAAAAGTGGGTTGCATCTGGATTGATGGAGGTACACCCGCTGCATCAAGGCAACAATTGGTTACAGATTTCCAGGAAAAGGATTATATCAAGGCAGCTGTACTATCCATTAAAGCGGGAGGAGTTGGATTAACTTTAACTGCTGCAAGCACAGTTATCTTTACAGAACAATCCTGGACTCCAGGTGACCTAATTCAGGCCAAAGATCGTGCGTATAGAATTGGTCAGGTCTCATCAGTGTTAGATGGCCATGAGAACACCTTAGCTGTGTCAAATAATCATCCATTGAGTAGCCCTGCAAAGCATACTACTATTGGGCATAGGCCTTCAAAGCAGAGAACTCTTGACCAGTTTGTCAGAAGATGTGATAACGTGGATAGGTCGGAAGTCGGAACATCAGCCTGA 1314 0.4711 MALPTCLTSISLALTSSRMTTITTSGTPTLTTITSTIVAPVTTSTTSLTSRHHRCTLLHHHHHFPDPVVTSIVSVITTFILTATLILSASASTSASTSPPPLAPLRPRPLPPRRPTIPKPSHQTSFPIPVLKSGSFAPREKMSLLKNCRSFLSNFFFIPAGMLQRNSNMTRLWMFPLSSLSEAEKVLGEISNYKVQLEVVKAKIKSAKSKDESESVKFTQKNLINKIYTNSADAKIPATLEYLGTFIEAGCKFLIFAHSAKSKDESESVKFTQKNLINKAGCKFLIFAHHQPMIDAIHECLLKKKVGCIWIDGGTPAASRQQLVTDFQEKDYIKAAVLSIKAGGVGLTLTAASTVIFTEQSWTPGDLIQAKDRAYRIGQVSSVLDGHENTLAVSNNHPLSSPAKHTTIGHRPSKQRTLDQFVRRCDNVDRSEVGTSA 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02477 437 Coils Coil 190 210 - -
Adu01g02477 437 MobiDBLite consensus disorder prediction 395 414 - -
Adu01g02477 437 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 266 382 IPR027417 -
Adu01g02477 437 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 272 419 IPR001650 -
Adu01g02477 437 Gene3D - 162 384 IPR027417 -
Adu01g02477 437 PANTHER DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER 183 263 - -
Adu01g02477 437 Pfam Helicase conserved C-terminal domain 278 378 IPR001650 -
Adu01g02477 437 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A-LIKE PROTEIN 1 270 383 IPR030101 GO:0006281|GO:0031297|GO:0036310
Adu01g02477 437 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A-LIKE PROTEIN 1 183 263 IPR030101 GO:0006281|GO:0031297|GO:0036310
Adu01g02477 437 MobiDBLite consensus disorder prediction 92 127 - -
Adu01g02477 437 PANTHER DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER 270 383 - -
Adu01g02477 437 SMART helicmild6 295 378 IPR001650 -
Adu01g02477 437 MobiDBLite consensus disorder prediction 100 118 - -
Adu01g02477 437 CDD SF2_C_SNF 279 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02477 Adu-Chr1 93875951 93880909 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02477 256 379 RAD5 or RAD16-like Gene Family AT1G05120 32.800 5.58e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02477 K14440 - ahf:112723272 338.576