Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02473 ATGTTGCAGCGAAATTCCAATATGACCAGGTTTCACATGCTAACTTCATCAAGAGTAATAATTTCTGCTTTTCGGAGAATCCCTAGATCTTCTTGGAATGCAAAAGAAAGGTTATGGATGTTTCCGCTTTCTTCCTTATCAGAAGCAGAGAAGGTTCTAGGAGAAATATCTAATTATAAAGTTCAGTTGGAGGTGGTAAAAGCCAAAATCAAGTCTGCTAAATCAAAAGATGAGTCTGAATCTGTTAAATTTACTCAAAAGAATCTGATTAACAAGATATATACTAATTCTGCAGATGCCAAGATTCCTGCTACTCTTGAGTATCTCGGAACTTTCATTGAGGCAGGTTGCAAGTTTCTTATATTTGCGCACCATCAGCCAATGATAGATGCGATACATGAGTGCCTTCTTAAGAAAAAAGTGAGTTGCATCTGGATTGATGGAGGTACACCTGCTGCATCAAGGCAACAATTGGTGGAAAAGGATTATATCAAGGCAGCTGTACTATCCATTAAAGCGGGAGGAGTTGGATTAACTTTAACTGCTGCAAGCACAGTTATCTTTACAGAACAATCCTGGACTCCAGGTGACCTAATTCAGGCCAAAGATCGTGCATATAGAATTGGTCAGGTCTCATCAGTAAATATATACTAG 654 0.3853 MLQRNSNMTRFHMLTSSRVIISAFRRIPRSSWNAKERLWMFPLSSLSEAEKVLGEISNYKVQLEVVKAKIKSAKSKDESESVKFTQKNLINKIYTNSADAKIPATLEYLGTFIEAGCKFLIFAHHQPMIDAIHECLLKKKVSCIWIDGGTPAASRQQLVEKDYIKAAVLSIKAGGVGLTLTAASTVIFTEQSWTPGDLIQAKDRAYRIGQVSSVNIY 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02473 217 PANTHER DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER 58 217 - -
Adu01g02473 217 Pfam Helicase conserved C-terminal domain 105 209 IPR001650 -
Adu01g02473 217 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A-LIKE PROTEIN 1 15 64 IPR030101 GO:0006281|GO:0031297|GO:0036310
Adu01g02473 217 SMART helicmild6 130 209 IPR001650 -
Adu01g02473 217 Coils Coil 56 76 - -
Adu01g02473 217 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 92 217 IPR027417 -
Adu01g02473 217 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A-LIKE PROTEIN 1 58 217 IPR030101 GO:0006281|GO:0031297|GO:0036310
Adu01g02473 217 PANTHER DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER 15 64 - -
Adu01g02473 217 ProSiteProfiles HARP domain profile. 1 67 IPR010003 -
Adu01g02473 217 CDD SF2_C_SNF 99 217 - -
Adu01g02473 217 Gene3D - 16 217 IPR027417 -
Adu01g02473 217 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 105 217 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02473 Adu-Chr1 93829381 93831986 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02473 84 216 RAD5 or RAD16-like Gene Family AT1G05120 30.496 1.05e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02473 K14440 - adu:107484479 370.933