Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02467 ATGTTGGAGGCGGTAAAAGCCAAAATCAAATCTGCTAAATCAAAAGATGAGTCTGAATCTGTTAAATTTACTCAAAAGAATCTGATTAACAAGGCAGGTTGCAAGTTTCTTATATTTGCGCACCATCAGCCAATGATAGATGCGATACATGAGTGCCTTCTTAAGAAAAAAGTGGGTTGCATCTGGATTGATGGAGGTACACCCGCTGCATCAAGGCAACAATTGGTTACAGATTTCCAGGAAAAGGATTATATCAAGGCAGCTGTACTATCCATTAAAGCGGGAGGAGTTGGATTAACTTTAACTGCTGCAAGCACAGTTATCTTTACAGAACAATCCTGGACTCCAGGTGACCTAATTCAGGCCAAAGATCGTGCATATAGAATTGGTCAGGTGTTAGATGGCCATGAGAACACCTTAGCTGTGTCAAATAATCATCCATTGAGTAGCCCTGCAAAGCATACTACTATTGGGCATAGGCCTTCAAAGCAGAGAACTCTTGACCAGTTTGTCAGAAGATGTGATAATGTGGATAGGTCAAGTAAAAAGCTGAAATCACAAGACATAGAGGAATCATCCTCAGGACATTCCAAATGCATTTTGCAGTCGGTTAAGGCTTCATTGACCAAGCAGCCACGAAGCGAATCCATGAGATACACAGTTTCTGATGGACCAAGAAAATCCATGGATAGAGTTGATGGCTCAGGCGTATCCCCAGTACCATCCTATGGTAGCAGCAAAAGAATCACCGAACCTTCATCAGCAAAAAAGCAATCAAAGATGATAGAGTCTTTTGAGGAGAAGGTGATCAAAATTGAAGAAAGTTAA 828 0.4118 MLEAVKAKIKSAKSKDESESVKFTQKNLINKAGCKFLIFAHHQPMIDAIHECLLKKKVGCIWIDGGTPAASRQQLVTDFQEKDYIKAAVLSIKAGGVGLTLTAASTVIFTEQSWTPGDLIQAKDRAYRIGQVLDGHENTLAVSNNHPLSSPAKHTTIGHRPSKQRTLDQFVRRCDNVDRSSKKLKSQDIEESSSGHSKCILQSVKASLTKQPRSESMRYTVSDGPRKSMDRVDGSGVSPVPSYGSSKRITEPSSAKKQSKMIESFEEKVIKIEES 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02467 275 MobiDBLite consensus disorder prediction 206 262 - -
Adu01g02467 275 Pfam Helicase conserved C-terminal domain 30 130 IPR001650 -
Adu01g02467 275 CDD SF2_C_SNF 31 131 - -
Adu01g02467 275 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A-LIKE PROTEIN 1 7 132 IPR030101 GO:0006281|GO:0031297|GO:0036310
Adu01g02467 275 SMART helicmild6 47 130 IPR001650 -
Adu01g02467 275 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 24 185 IPR001650 -
Adu01g02467 275 Gene3D - 3 191 IPR027417 -
Adu01g02467 275 MobiDBLite consensus disorder prediction 239 259 - -
Adu01g02467 275 PANTHER DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER 7 132 - -
Adu01g02467 275 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 27 144 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02467 Adu-Chr1 93691241 93695322 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02467 6 131 RAD5 or RAD16-like Gene Family AT1G05120 29.921 9.35e-14 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02467 K14440 - adu:107462099 248.054