Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02466 ATGGCTCTGGCCACCTGCCTCACCTCTATCCTCCTCCAGGATGACCACGATCACCACCTCCGGTACTCCCACCCTGACCACCATCACCTCTACCATAGTGGCCCCGTAACCACCTCCACCACCTCCCTGACCTCCCGTCACCACCGTTGTACCCTCCTCCACCACCACCACTTCCCTGACCCCGTCGTCACCTCCATCATCTCCGTCATCACCACCTTCGTCCTCACCGCTACCCTCATCCTCTCCGCCTCTGCCTCCACGTCGGCCTCTACCTCACCACCACCTCTAGCTCCTCTACGGCCGCGACCCCTCCCCCCTCGCCGTCCAACCATTCCCAACCCTTCCCACCAAACCCCATTTCCGATTCCCGTCCTCAAAAAAGAATCAAAAGACCCTGTGGTTCAGTTTCTGGAAGGAGAACTACTCATAGTGTGTTTGTATTGCAATCCAGGTGGAAGCTTTGCCCCAAGGGAAAAAATGAGCCTTCTAAAGAACTGCCGAAGTTTTCTGTCAAACTTTTTCTTCATTCCAGTGGCCATGTTGCAGCGAAATTCCAATATGACCAGGGGCTATGTCTTTGACCTTGAACAAGTTCCTGCATACTCATGCTTTATAGGCTATGTTTCATGGCAGTTGGAGGTGGTAAAAGCCAAACTCAAGTCTGCTAAATCAAAAGATGAGTCTGAATCTGTTAAATTTACTCAAAAGAATCTGATTAACAAGATGCCAAGATTCCTGCTACTCTTGAGTATCTCGGAACTTTCATTTCCTGCTGCTCTTGAGTATCTCGGAACTGTCATTGAGGCAGGTTGCAAGTTTCTTATATTTGCGCACCATCAGCCAATGATAGATGCGATACATGAGTGCCTTCTTAAGAAAAAAGTGAGTTGCATCTGGATTGATGGAGGTACACCTGCTGCATCAAGGCAACAATTGGTGGAAAAGGATTATATCAAGGCAGCTGTACTATCCATTAAAGCGGGAGGAGTTGGATTAACTTTAACTGCTGCAAGCACAGTTATCTTTACAGAACAATCCTGGACTCCAGGTGACCTAATTCGGCCAATGATCGTGCTCATAGAATTGGCCAGGTTGCAAGTTTCTTATATTTGCACACCATCAGCCAATGAGATACATGAGTGCCTTCTTAAGAAAAAAGTGGGTTGCATCCGGATTGATGGAGGTACACCCGCTGCATCAAGGCAACAATTGGTTACAGATTTCCGGGAAAAGGATTATATCAAGGCAGCTGTAGTATGGTGCTATCCATTAAAGCGGGAGGAGTTGGATTAA 1293 0.4803 MALATCLTSILLQDDHDHHLRYSHPDHHHLYHSGPVTTSTTSLTSRHHRCTLLHHHHFPDPVVTSIISVITTFVLTATLILSASASTSASTSPPPLAPLRPRPLPPRRPTIPNPSHQTPFPIPVLKKESKDPVVQFLEGELLIVCLYCNPGGSFAPREKMSLLKNCRSFLSNFFFIPVAMLQRNSNMTRGYVFDLEQVPAYSCFIGYVSWQLEVVKAKLKSAKSKDESESVKFTQKNLINKMPRFLLLLSISELSFPAALEYLGTVIEAGCKFLIFAHHQPMIDAIHECLLKKKVSCIWIDGGTPAASRQQLVEKDYIKAAVLSIKAGGVGLTLTAASTVIFTEQSWTPGDLIRPMIVLIELARLQVSYICTPSANEIHECLLKKKVGCIRIDGGTPAASRQQLVTDFREKDYIKAAVVWCYPLKREELD 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02466 430 PANTHER DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER 375 419 - -
Adu01g02466 430 PANTHER DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER 211 353 - -
Adu01g02466 430 CDD SF2_C_SNF 256 350 - -
Adu01g02466 430 Pfam Helicase conserved C-terminal domain 267 353 IPR001650 -
Adu01g02466 430 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A-LIKE PROTEIN 1 375 419 IPR030101 GO:0006281|GO:0031297|GO:0036310
Adu01g02466 430 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A-LIKE PROTEIN 1 211 353 IPR030101 GO:0006281|GO:0031297|GO:0036310
Adu01g02466 430 MobiDBLite consensus disorder prediction 94 119 - -
Adu01g02466 430 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 246 353 IPR027417 -
Adu01g02466 430 Gene3D - 207 356 IPR027417 -
Adu01g02466 430 MobiDBLite consensus disorder prediction 86 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02466 Adu-Chr1 93676281 93682678 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02466 258 349 RAD5 or RAD16-like Gene Family AT5G22750 30.208 9.45e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02466 K14440 - ahf:112723252 311.997