Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02463 ATGCCAAGATTCCCGTTGTTCTTGAATATCTCGGAACTGTCATTGAGGTATTGCTCCCCTCCACTGCTTCAAAGCAATAAAATGTCAATAAAGAATTTAGTGACTGCTGCTGCAGGTTGCAAGTTTCTTATATTTGCGCACCATCAGCCAATGATAGATGCGATACATGAGTGCCTTCTTAAGAAAAAAGTGGGTTGCATCTGGATTGATGGAGGTACACCCGCTGCATCAAGGCAACAATTGGTTACAGATTTCCAGGAAAAGGATTATATCAAGGCAACTGTACTATCCATTAAAGCGGGAGGAGTTGGATTAACTTTAACTGATGCAAGCACAGTTATCTTTACAGAACAATCCTGGACTCCAGGTGACCTAATTCAGGCCAAAGATCGTGCGTATAGAATTGGTCAGTCTTTCGCCGCTTGGTATAGCATTGACTTAACATTTATTATGCATTGA 459 0.4139 MPRFPLFLNISELSLRYCSPPLLQSNKMSIKNLVTAAAGCKFLIFAHHQPMIDAIHECLLKKKVGCIWIDGGTPAASRQQLVTDFQEKDYIKATVLSIKAGGVGLTLTDASTVIFTEQSWTPGDLIQAKDRAYRIGQSFAAWYSIDLTFIMH 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02463 152 Gene3D - 19 141 IPR027417 -
Adu01g02463 152 PANTHER DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER 30 138 - -
Adu01g02463 152 SMART helicmild6 53 136 IPR001650 -
Adu01g02463 152 CDD SF2_C_SNF 25 137 - -
Adu01g02463 152 Pfam Helicase conserved C-terminal domain 32 136 IPR001650 -
Adu01g02463 152 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A-LIKE PROTEIN 1 30 138 IPR030101 GO:0006281|GO:0031297|GO:0036310
Adu01g02463 152 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 29 152 IPR001650 -
Adu01g02463 152 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 140 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02463 Adu-Chr1 92578459 92579796 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02463 23 137 RAD5 or RAD16-like Gene Family AT1G05120 32.174 2.03e-14 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02463 K14440 - ahf:112723272 235.728